Comparing CA265_RS08615 FitnessBrowser__Pedo557:CA265_RS08615 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
7cyyC Crystal structure of arabinose isomerase from hybrid ai8 with adonitol
60% identity, 100% coverage: 1:496/496 of query aligns to 2:495/497 of 7cyyC
Q9S467 L-arabinose isomerase; EC 5.3.1.4 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see paper)
59% identity, 100% coverage: 1:496/496 of query aligns to 1:494/496 of Q9S467
4r1qE Crystal structure of thermophilic geobacillus kaustophilus l-arabinose isomerase in complex with l-arabitol
58% identity, 100% coverage: 1:496/496 of query aligns to 1:494/496 of 4r1qE
7chlA Crystal structure of hybrid arabinose isomerase ai-10
58% identity, 100% coverage: 2:496/496 of query aligns to 1:496/498 of 7chlA
7ch3B Crystal structure of arabinose isomerase from hyper thermophilic bacterium thermotoga maritima (tmai) triple mutant (k264a, e265a, k266a)
55% identity, 100% coverage: 1:495/496 of query aligns to 1:491/495 of 7ch3B
4f2dA Crystal structure of escherichia coli l-arabinose isomerase (ecai) complexed with ribitol
54% identity, 100% coverage: 1:495/496 of query aligns to 1:496/498 of 4f2dA
7ch3A Crystal structure of arabinose isomerase from hyper thermophilic bacterium thermotoga maritima (tmai) triple mutant (k264a, e265a, k266a)
54% identity, 100% coverage: 1:495/496 of query aligns to 1:465/469 of 7ch3A
>CA265_RS08615 FitnessBrowser__Pedo557:CA265_RS08615
MIDLKKLQVWFITGTQHLYGEETLKQVAAHAQEVADSLNQNGSISVSVVYKPIVKTTEEI
FETLQQANIDENCIGVITWMHTFSPAKMWIRGLNVLQKPLLHLHTQFNRDIPWNTIDMDF
MNLNQSAHGDREFGFMVSRMRKDRKVVVGHWQDEEVAKQIDTWCRAAAGWHDWQGAKFAR
FGDNMRYVAVTDGDKVEAEMKFGFAVNTYGIGDLVAVINGIGEDAIQSLLEEYEATYEMA
DDLKAGGARHSSVYEAAKIELGLRKFLVDGGFKGFSDTFEDLHGMIQLPGIAAQRLMADG
YGFAGEGDWKTAALVRACKVMGAGLAGGNAFMEDYTYHFDPANSMVLGSHMLEVDASLAS
GKASLEVHPLGIGGKADPARLVFNVAGGDALNAALIDMGNRFRLLVNEVKAVEAEHDLPN
LPVARVLWKPLPDMKTGCAAWIYAGGAHHTAYSQNLTTEHLLDFANIAGLEYVNIGADTK
INQFRNELHWNEVFYK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory