SitesBLAST
Comparing CA265_RS14455 FitnessBrowser__Pedo557:CA265_RS14455 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
2jjgA Crystal structure of the m. Tuberculosis lysine-epsilon aminotransferase (rv3290c) complexed to an inhibitor (see paper)
47% identity, 99% coverage: 5:443/443 of query aligns to 1:434/435 of 2jjgA
- active site: V6 (= V11), F153 (= F158), E224 (= E232), D257 (= D265), Q260 (= Q268), K286 (= K296), T316 (= T326), R408 (= R417)
- binding (2S)-1-methyl-2-[(2S,4R)-2-methyl-4-phenylpentyl]piperidine: A115 (≠ G120), F153 (= F158), G155 (= G160), R156 (= R161), K167 (≠ L172), I170 (≠ K175)
- binding pyridoxal-5'-phosphate: G114 (= G119), A115 (≠ G120), F153 (= F158), H154 (= H159), E224 (= E232), D257 (= D265), V259 (= V267), Q260 (= Q268), K286 (= K296)
2cjhA Lysine aminotransferase from m. Tuberculosis in the internal aldimine form with bound substrate 2-ketoglutarate (see paper)
47% identity, 99% coverage: 5:443/443 of query aligns to 1:434/435 of 2cjhA
- active site: V6 (= V11), F153 (= F158), E224 (= E232), D257 (= D265), Q260 (= Q268), K286 (= K296), T316 (= T326), R408 (= R417)
- binding 2-oxoglutaric acid: V49 (≠ F54), F153 (= F158), R156 (= R161), E229 (= E237), R408 (= R417)
- binding pyridoxal-5'-phosphate: G114 (= G119), A115 (≠ G120), F153 (= F158), H154 (= H159), E224 (= E232), D257 (= D265), V259 (= V267), Q260 (= Q268), K286 (= K296)
2cjgA Lysine aminotransferase from m. Tuberculosis in bound pmp form (see paper)
47% identity, 99% coverage: 5:443/443 of query aligns to 1:434/435 of 2cjgA
- active site: V6 (= V11), F153 (= F158), E224 (= E232), D257 (= D265), Q260 (= Q268), K286 (= K296), T316 (= T326), R408 (= R417)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G114 (= G119), A115 (≠ G120), F153 (= F158), H154 (= H159), E224 (= E232), D257 (= D265), V259 (= V267), K286 (= K296)
2cjdA Lysine aminotransferase from m. Tuberculosis in external aldimine form (see paper)
47% identity, 99% coverage: 5:443/443 of query aligns to 1:434/435 of 2cjdA
- active site: V6 (= V11), F153 (= F158), E224 (= E232), D257 (= D265), Q260 (= Q268), K286 (= K296), T316 (= T326), R408 (= R417)
- binding lysine: V49 (≠ F54), F153 (= F158), R156 (= R161), E229 (= E237), K286 (= K296)
- binding pyridoxal-5'-phosphate: G114 (= G119), A115 (≠ G120), F153 (= F158), H154 (= H159), E224 (= E232), D257 (= D265), V259 (= V267), Q260 (= Q268)
2cinA Lysine aminotransferase from m. Tuberculosis in the internal aldimine form (see paper)
47% identity, 99% coverage: 5:443/443 of query aligns to 1:434/435 of 2cinA
- active site: V6 (= V11), F153 (= F158), E224 (= E232), D257 (= D265), Q260 (= Q268), K286 (= K296), T316 (= T326), R408 (= R417)
- binding pyridoxal-5'-phosphate: G114 (= G119), A115 (≠ G120), F153 (= F158), H154 (= H159), E224 (= E232), D257 (= D265), V259 (= V267), Q260 (= Q268), K286 (= K296)
P80404 4-aminobutyrate aminotransferase, mitochondrial; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; GABA-T; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22 from Homo sapiens (Human) (see 3 papers)
31% identity, 99% coverage: 1:440/443 of query aligns to 45:496/500 of P80404
- Q56 (≠ N12) to R: in dbSNP:rs1731017
- R220 (= R161) to K: in GABATD; 25% reduction in 4-aminobutyrate aminotransferase activity; dbSNP:rs121434578
- C321 (≠ A260) mutation C->M,S,A,G,K: Loss of 4-aminobutyrate aminotransferase activity.
P80147 4-aminobutyrate aminotransferase, mitochondrial; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; GABA-T; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22 from Sus scrofa (Pig) (see 3 papers)
31% identity, 99% coverage: 1:440/443 of query aligns to 45:496/500 of P80147
- C163 (≠ G118) binding [2Fe-2S] cluster
- GS 164:165 (≠ GG 119:120) binding in other chain
- C166 (≠ L121) binding [2Fe-2S] cluster
- R220 (= R161) binding substrate
- K357 (= K296) modified: N6-(pyridoxal phosphate)lysine
- T381 (= T326) binding pyridoxal 5'-phosphate
Sites not aligning to the query:
- 1:28 modified: transit peptide, Mitochondrion
1ohyA 4-aminobutyrate-aminotransferase inactivated by gamma-ethynyl gaba (see paper)
31% identity, 99% coverage: 1:440/443 of query aligns to 7:458/461 of 1ohyA
- active site: F179 (= F158), E255 (= E232), D288 (= D265), Q291 (= Q268), K319 (= K296), T343 (= T326), R435 (= R417)
- binding fe2/s2 (inorganic) cluster: A124 (= A117), C125 (≠ G118), C128 (≠ L121)
- binding (4e)-4-aminohex-4-enoic acid: I62 (≠ F54), F179 (= F158), R182 (= R161), K319 (= K296), F341 (≠ N324), T343 (= T326)
- binding pyridoxal-5'-phosphate: G126 (= G119), S127 (≠ G120), N130 (≠ V123), F179 (= F158), H180 (= H159), G181 (= G160), D288 (= D265), V290 (= V267), Q291 (= Q268), K319 (= K296)
1ohwA 4-aminobutyrate-aminotransferase inactivated by gamma-vinyl gaba (see paper)
31% identity, 99% coverage: 1:440/443 of query aligns to 7:458/461 of 1ohwA
- active site: F179 (= F158), E255 (= E232), D288 (= D265), Q291 (= Q268), K319 (= K296), T343 (= T326), R435 (= R417)
- binding fe2/s2 (inorganic) cluster: C125 (≠ G118), C128 (≠ L121)
- binding pyridoxal-5'-phosphate: G126 (= G119), S127 (≠ G120), F179 (= F158), H180 (= H159), E255 (= E232), D288 (= D265), V290 (= V267)
- binding 4-amino hexanoic acid: I62 (≠ F54), F179 (= F158), R182 (= R161), E260 (= E237), Q291 (= Q268), K319 (= K296), F341 (≠ N324), T343 (= T326)
6b6gA Crystal structure of gaba aminotransferase bound to (s)-3-amino-4- (difluoromethylenyl)cyclopent-1-ene-1-carboxylic acid, an potent inactivatorfor the treatment of addiction (see paper)
31% identity, 99% coverage: 1:440/443 of query aligns to 7:458/461 of 6b6gA