Comparing CA265_RS17965 FitnessBrowser__Pedo557:CA265_RS17965 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 9 hits to proteins with known functional sites (download)
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
37% identity, 93% coverage: 27:430/434 of query aligns to 38:423/440 of O04373
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
38% identity, 91% coverage: 33:427/434 of query aligns to 5:373/380 of P54955
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
35% identity, 91% coverage: 35:430/434 of query aligns to 13:388/389 of 4ewtA
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
38% identity, 90% coverage: 42:430/434 of query aligns to 56:427/442 of P54968
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
34% identity, 88% coverage: 26:408/434 of query aligns to 12:374/398 of 6slfA
3ramA Crystal structure of hmra (see paper)
25% identity, 65% coverage: 45:327/434 of query aligns to 25:273/391 of 3ramA
Sites not aligning to the query:
7yh4A Crystal structure of human cytosolic beta-alanyl lysine dipeptidase (pm20d2)
24% identity, 60% coverage: 128:388/434 of query aligns to 101:340/400 of 7yh4A
Sites not aligning to the query:
5vo3A Crystal structure of dape in complex with the products (succinic acid and diaminopimelic acid) (see paper)
21% identity, 66% coverage: 31:317/434 of query aligns to 2:282/380 of 5vo3A
Sites not aligning to the query:
P44514 Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see 3 papers)
21% identity, 65% coverage: 34:317/434 of query aligns to 1:278/377 of P44514
Sites not aligning to the query:
>CA265_RS17965 FitnessBrowser__Pedo557:CA265_RS17965
MKKIFLIGFSLLALNSFAQKSDLRPLVSKKADAIEQKVIAWRRDFHEHPELGNTEVRTAG
IIAKHLESLGIQVKTGVAKTGVVGVLKGGKPGPVVALRADMDGLPVTERVDVPFASKVKT
QYNGQEVGVMHACGHDSHVAILMGVAEVLASMQKDIQGTVKFIFQPAEEGVPAGDEGGAA
LMIKEGVLENPKVDVIFGLHINSQTEVGDVTYRPGGTMAAVNDMKITVTGRQAHGAYPWN
SIDPVVVSAQIINSLQTIVSRNLNVTENPGVVTIGAINGGVRSNIIPEKVEMLGTVRNFS
KEDEAMFIERIKTIVTKTAEAGGATAEVKIPYSNHYPVTFNHIALTEKMLPSMQNTAGKD
HVKLKPPVTGAEDFSFFQEKIPGLFVFLGGMPKGKDPLKAPSHHTPDFYLDESGFVLGVK
LLSNLTLDYMSMKK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory