Comparing CA265_RS21785 FitnessBrowser__Pedo557:CA265_RS21785 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
4rqoB Crystal structure of l-serine dehydratase from legionella pneumophila (see paper)
50% identity, 99% coverage: 5:475/475 of query aligns to 2:448/448 of 4rqoB
2iafA Crystal structure of a fragment (residues 11 to 161) of l-serine dehydratase from legionella pneumophila
47% identity, 31% coverage: 20:164/475 of query aligns to 1:140/140 of 2iafA
>CA265_RS21785 FitnessBrowser__Pedo557:CA265_RS21785
MIKEQISVFDIFKIGIGPSSSHTLGPWRAAQQFTASLAQNHLIDEIEGIKILLYGSLAKT
GKGHGTDVAILLGLTGADPVTFDVDAVTPTFESIQRDQKLNLAGHLIIDFDYDNDLLFLF
AESLPFHPNAVTFQAFLKGGKAFSETYYSIGGGFVVKEGEDNSKKPQVDLPFPVEKAKDL
LHWCLSTGLKVSEIVMENELAWRTEAETKKGILQHFAVMSDCIYRGCHTTGFLPGGLNVA
RRAFPLNKRLIGKSEYSDYNSWVEAIRKGGNGFNYTLDWVSCFALAVNEENASFGRVVTA
PTNGAAGVIPAVLQYFITFCDGYSEEKIMQFIACASEIGSIFKKGATISAAMGGCQAEIG
VSSAMAAAALTECLGGSQRQVLMAAEIAMEHHLGLTCDPIGGLVQIPCIERNTMGAIKAI
TASQLALQSNPDKAKVSLDAVVNTMWETALDMNAKYKETSDGGLATNIPISLPEC
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory