Comparing CA265_RS22275 FitnessBrowser__Pedo557:CA265_RS22275 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 10 hits to proteins with known functional sites (download)
6uekA Structure of urocanate hydratase from trypanosoma cruzi in complex with NAD+ (see paper)
56% identity, 98% coverage: 7:662/668 of query aligns to 9:660/660 of 6uekA
6uekD Structure of urocanate hydratase from trypanosoma cruzi in complex with NAD+ (see paper)
54% identity, 94% coverage: 31:657/668 of query aligns to 19:585/585 of 6uekD
7jfzA Structure of urocanate hydratase from legionella pneumophila bound to NAD
35% identity, 83% coverage: 101:653/668 of query aligns to 20:545/547 of 7jfzA
P25080 Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 4 papers)
35% identity, 79% coverage: 101:628/668 of query aligns to 29:534/557 of P25080
Sites not aligning to the query:
1uwkA The high resolution structure of urocanate hydratase from pseudomonas putida in complex with urocanate (see paper)
35% identity, 79% coverage: 101:628/668 of query aligns to 26:531/554 of 1uwkA
2fknB Crystal structure of urocanase from bacillus subtilis
35% identity, 80% coverage: 94:628/668 of query aligns to 12:524/546 of 2fknB
P25503 Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Bacillus subtilis (strain 168)
35% identity, 80% coverage: 94:628/668 of query aligns to 18:530/552 of P25503
Q5L084 Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Geobacillus kaustophilus (strain HTA426)
36% identity, 79% coverage: 101:628/668 of query aligns to 24:529/551 of Q5L084
7nedA Thiourocanate hydratase from paenibacillus sp. Soil724d2 in complex with cofactor NAD+ and urocanate (see paper)
30% identity, 80% coverage: 94:626/668 of query aligns to 13:521/545 of 7nedA
1x87A 2.4a x-ray structure of urocanase protein complexed with NAD
31% identity, 79% coverage: 101:628/668 of query aligns to 18:473/495 of 1x87A
>CA265_RS22275 FitnessBrowser__Pedo557:CA265_RS22275
MDFKAQLLAGIPSTLPAKKPRNTELSHAPVRKDVLTADEKKLAVKNALRYFPKAWHQELA
QEFLTELENYGHIYMYRFMPDYAIYARDIAAYPCLTVHAAAIMLMIQNNLDPAIAQHPEE
LITYGGNGSVFQNWAQYLLTMQYLATMTDQQTLNIYSGHPQGLFPSNTAAPRVVVTNGMM
VPNYSSPEDLEKFNALGVTQYGQMTAGSYMYIGPQGIVHGTAITLMNAFRKKGFYGKDTA
GKIFLTAGLGGMSGAQTKAGNIVGCITVCAEVNPKAATKRQQQGWVDELIDNLDELINRV
IVAQKEKETVSLAYIGNIVDVWERFDQENIEVAIGSDQTSLHNPYSGGYYPVGLSFAEAN
EMMAGAPGQFKVYVQDSLKRQAASINKHTGKGTYFFDYGNAFLLECSRAGADVMSPNGID
FKYPSYVEDILGPLCFDYGFGPFRWVCASGNENDLDLTDQMAKEVMEEIKLSAPAEIQQQ
LQDNINWISAAKENKLVVGSKARILYADAEGRAKIALRFNQAIKTGELSAPVILGRDHHD
VSGTDSPFRETSNIYDGSRFTADMAIHNVIGDSFRGATWVSIHNGGGVGWGEVINGGFGM
VLDGTEQAAEKLQNMLFYDVNNGIARRSWARNKEARFAIEREMERTGTLKITLPNLVDDE
VLDGLEID
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory