Comparing CA265_RS23295 FitnessBrowser__Pedo557:CA265_RS23295 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8tdfA Structure of alistipes sp. Glucoside-3-dehydrogenase al3 (see paper)
42% identity, 87% coverage: 45:465/484 of query aligns to 1:396/452 of 8tdfA
8tdhA Structure of trehalose bound alistipes sp. Glucoside-3-dehydrogenase al3 (see paper)
42% identity, 87% coverage: 46:465/484 of query aligns to 1:395/451 of 8tdhA
Sites not aligning to the query:
7xreC Crystal structure of dgpa (see paper)
30% identity, 25% coverage: 73:193/484 of query aligns to 32:152/363 of 7xreC
Sites not aligning to the query:
7xr9A Crystal structure of dgpa with glucose (see paper)
33% identity, 20% coverage: 95:193/484 of query aligns to 46:142/344 of 7xr9A
Sites not aligning to the query:
3ec7A Crystal structure of putative dehydrogenase from salmonella typhimurium lt2
28% identity, 38% coverage: 50:233/484 of query aligns to 7:190/336 of 3ec7A
Sites not aligning to the query:
3dtyA Crystal structure of an oxidoreductase from pseudomonas syringae
28% identity, 29% coverage: 56:196/484 of query aligns to 13:164/374 of 3dtyA
Sites not aligning to the query:
8tdiG Structure of p2b11 glucuronide-3-dehydrogenase (see paper)
22% identity, 45% coverage: 77:295/484 of query aligns to 40:273/386 of 8tdiG
Sites not aligning to the query:
7d5nB Crystal structure of inositol dehydrogenase homolog complexed with nadh and myo-inositol from azotobacter vinelandii
42% identity, 14% coverage: 96:165/484 of query aligns to 65:140/389 of 7d5nB
Sites not aligning to the query:
7d5mA Crystal structure of inositol dehydrogenase homolog complexed with NAD+ from azotobacter vinelandii
42% identity, 14% coverage: 96:165/484 of query aligns to 66:141/389 of 7d5mA
Sites not aligning to the query:
7d5nA Crystal structure of inositol dehydrogenase homolog complexed with nadh and myo-inositol from azotobacter vinelandii
42% identity, 14% coverage: 96:165/484 of query aligns to 65:140/379 of 7d5nA
Sites not aligning to the query:
3e18A Crystal structure of NAD-binding protein from listeria innocua
28% identity, 25% coverage: 47:166/484 of query aligns to 3:121/348 of 3e18A
Sites not aligning to the query:
3m2tA The crystal structure of dehydrogenase from chromobacterium violaceum
26% identity, 32% coverage: 50:205/484 of query aligns to 8:162/342 of 3m2tA
Sites not aligning to the query:
4mjlD Crystal structure of myo-inositol dehydrogenase from lactobacillus casei in complex with NAD and d-chiro-inositol
29% identity, 30% coverage: 47:190/484 of query aligns to 4:146/339 of 4mjlD
Sites not aligning to the query:
4mioD Crystal structure of myo-inositol dehydrogenase from lactobacillus casei in complex with NAD(h) and myo-inositol
29% identity, 30% coverage: 47:190/484 of query aligns to 4:146/339 of 4mioD
Sites not aligning to the query:
4mioA Crystal structure of myo-inositol dehydrogenase from lactobacillus casei in complex with NAD(h) and myo-inositol
29% identity, 30% coverage: 47:190/484 of query aligns to 4:146/339 of 4mioA
Sites not aligning to the query:
4minA Crystal structure of myo-inositol dehydrogenase from lactobacillus casei with bound cofactor NAD
29% identity, 30% coverage: 47:190/484 of query aligns to 4:146/339 of 4minA
Sites not aligning to the query:
6t2bB Glycoside hydrolase family 109 from akkermansia muciniphila in complex with galnac and NAD+.
29% identity, 27% coverage: 40:171/484 of query aligns to 25:167/439 of 6t2bB
Sites not aligning to the query:
Q2I8V6 1,5-anhydro-D-fructose reductase; Anhydrofructose reductase; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming); EC 1.1.1.292 from Ensifer adhaerens (Sinorhizobium morelense) (see paper)
29% identity, 28% coverage: 63:197/484 of query aligns to 18:155/333 of Q2I8V6
Sites not aligning to the query:
2glxA Crystal structure analysis of bacterial 1,5-af reductase (see paper)
29% identity, 28% coverage: 63:197/484 of query aligns to 17:154/332 of 2glxA
Sites not aligning to the query:
3ceaA Crystal structure of myo-inositol 2-dehydrogenase (np_786804.1) from lactobacillus plantarum at 2.40 a resolution
27% identity, 30% coverage: 48:192/484 of query aligns to 5:149/342 of 3ceaA
Sites not aligning to the query:
>CA265_RS23295 FitnessBrowser__Pedo557:CA265_RS23295
MIEDKANSKTENSRRNFIKTTALAAAGFMIVPRHVLGGPGFLAPSDRLQLAGIGAGGKGE
SDIASIVRGGKTDVAFLCDVDDRRAANSLKNFPKAKYYKDYRELLDKEGKNIDAVTVSTP
DHTHAQIAMAAMQLGKHVYVQKPLTHDIYEARMLTEAANRYKVVTQMGNQGASGDGVRRL
QEWYDAGRIGKVHTVYCWTNRPVWPQGISWPTGKAEIPKELDWDLWLGSAPYKEYVNKLV
PFNWRGWWDYGTGAIGDMGCHLVEPPFRVLGLDTPISVECSVGSVYVDEFKRAYLPESCP
PSSHVILTFAKTPKTKHEVQVHWMDGGIKPERPEELGPNESFGDNGVLFIGTKGKMICET
YGKNPKLLPLSRNESDKTKITIPRIANQEEGHYTQFAEAAIAGYGKMELSSPFEIAGPLT
ETLLIANLAIRGTDVQRRDAAGKISYPGRDIKMLWDKVKMKVTNFDEVNQFVKREYRKGW
TLGV
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory