SitesBLAST – Find functional sites

 

SitesBLAST

Comparing CA265_RS25055 FitnessBrowser__Pedo557:CA265_RS25055 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P52697 6-phosphogluconolactonase; 6-P-gluconolactonase; Pgl; EC 3.1.1.31 from Escherichia coli (strain K12) (see paper)
27% identity, 92% coverage: 30:369/369 of query aligns to 5:329/331 of P52697

query
sites
P52697
T
 
V
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Y
T
 
I
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A
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S
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P
K
 
E
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S
E
 
Q
G
 
Q
I
 
I
Y
 
H
T
 
V
Y
 
W
N
 
N
F
 
L
N
 
N
A
 
-
S
 
H
T
 
E
A
 
G
A
 
A
T
 
L
T
 
T
I
 
L
K
 
T
S
 
Q
I
 
V
T
 
V
K
 
D
N
 
V
T
 
P
A
 
G
N
 
Q
P
 
V
S
 
Q
Y
 
P
L
 
M
A
 
V
V
 
V
S
 
S
P
 
P
D
 
D
Q
 
K
K
 
R
F
 
Y
V
 
L
Y
 
Y
V
 
V
V
 
-
N
 
-
E
 
-
T
 
-
G
 
G
A
 
V
T
 
R
S
 
P
T
 
E
V
 
F
S
 
R
A
 
V
F
 
L
K
 
A
Y
 
Y
N
 
R
A
 
I
A
 
A
-
 
P
-
 
D
S
 
D
G
 
G
A
 
A
L
 
L
T
 
T
F
 
F
L
 
A
N
 
A
K
 
E
V
 
S
D
 
A
S
 
L
H
 
P
G
 
G
A
 
S
D
 
-
P
 
P
C
 
T
F
 
H
I
 
I
T
 
S
V
 
T
D
 
D
A
 
H
K
 
Q
N
 
G
-
 
Q
-
 
F
V
 
V
I
 
F
V
 
V
A
 
G
N
 
S
Y
 
Y
S
 
N
G
 
A
G
 
G
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N
L
 
V
A
 
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I
 
V
F
 
-
S
 
T
R
 
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K
 
L
A
 
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D
 
D
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G
A
 
L
L
 
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T
 
V
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G
A
 
V
L
 
V
Q
 
D
T
 
V
I
 
V
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H
 
-
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-
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-
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L
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D
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-
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-
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C
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H
M
 
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A
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D
Y
 
N
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L
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W
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V
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P
D
 
A
L
 
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G
 
K
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Q
D
 
D
R
 
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I
 
I
Y
 
C
I
 
L
Y
 
F
N
 
T
Y
 
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K
 
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A
 
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A
 
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D
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D
N
 
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H
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L
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A
K
 
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-
 
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S
 
A
V
 
E
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K
 
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N
 
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A
 
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A
G
 
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H
 
H
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M
T
 
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F
 
F
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H
P
 
P
N
 
N
G
 
E
K
 
Q
F
 
Y
A
 
A
Y
 
Y
L
 
C
A
 
V
H
 
N
E
 
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F
 
L
N
 
N
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S
S
 
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T
 
D
A
 
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F
 
W
A
 
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Y
 
L
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N
 
D
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-
 
H
G
 
G
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L
 
I
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C
I
 
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Q
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T
I
 
L
G
 
D
T
 
M
T
 
M
S
 
P
K
 
E
D
 
N
F
 
F
T
 
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G
 
D
K
 
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V
 
R
D
 
W
A
 
A
A
 
A
D
 
D
I
 
I
H
 
H
V
 
I
S
 
T
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P
D
 
D
G
 
G
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R
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H
L
 
L
Y
 
Y
E
 
A
T
 
C
N
 
D
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R
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D
 
T
A
 
A
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S
S
 
L
I
 
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S
 
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A
 
V
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F
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D
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G
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T
 
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D
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H
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G
 
G
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|
K
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Y
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L
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A
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A
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Q
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S
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H
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L
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K
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R
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Y
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A
D
 
V
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G
G
 
Q
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M
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W
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V
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V
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V
N
 
N

Query Sequence

>CA265_RS25055 FitnessBrowser__Pedo557:CA265_RS25055
MKKISSLFLLSILSTLTFAQKANYNLIVGTYTAPGKSEGIYTYNFNASTAATTIKSITKN
TANPSYLAVSPDQKFVYVVNETGATSTVSAFKYNAASGALTFLNKVDSHGADPCFITVDA
KNVIVANYSGGSLAIFSRKADGALTEALQTIEHTGKSIDPKGRQESAHVHMVKFTPDYKH
LIVNDLGEDRIYIYNYKPAAKENILTVKSVIKTNAGTGPRHITFSPNGKFAYLAHEFNGS
ITAFAYSNGSLTKIQEIGTTSKDFTGKVDAADIHVSADGKFLYETNRGDANSISAFSVLP
TGKLKFIETVSTLGKGPRNFTIDPTGKFLLIGHQYTNNIVIFKRNKTTGKLSDSGKRIDV
GAPVCLVFN

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory