Comparing CA265_RS25410 FitnessBrowser__Pedo557:CA265_RS25410 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
1kofA Crystal structure of gluconate kinase (see paper)
45% identity, 94% coverage: 6:163/168 of query aligns to 10:167/171 of 1kofA
1ko8A Crystal structure of gluconate kinase (see paper)
45% identity, 94% coverage: 6:163/168 of query aligns to 10:167/172 of 1ko8A
1ko5A Crystal structure of gluconate kinase (see paper)
45% identity, 94% coverage: 6:163/168 of query aligns to 10:167/172 of 1ko5A
>CA265_RS25410 FitnessBrowser__Pedo557:CA265_RS25410
MAGFIILMGVSGSGKTVIGKALAPKINAEFIDGDNLHSQRNVDKMAAGIPLTDADRLDWL
QLIAKVGREHVAHGTSCIIACSALKKSYRNLLRNDNPSIRFVYLQGSFGLIHDRIAKRSH
QYMPASLLKSQFETLEEPLADEGDVVTVLIDQSIPEIVNEIVKADLIS
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory