Comparing CCNA_00830 FitnessBrowser__Caulo:CCNA_00830 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
7kmoA Crystal structure of the gh35 beta-galactosidase (xac1772) from xanthomonas citri in complex with galactose
60% identity, 94% coverage: 36:549/549 of query aligns to 3:510/511 of 7kmoA
6tbjA Structure of a beta galactosidase with inhibitor (see paper)
57% identity, 94% coverage: 34:549/549 of query aligns to 1:522/525 of 6tbjA
6tbgA Structure of a beta galactosidase with inhibitor (see paper)
56% identity, 94% coverage: 34:549/549 of query aligns to 1:532/535 of 6tbgA
8pejA Cjgh35 with a galactosidase activity-based probe (see paper)
55% identity, 94% coverage: 34:549/549 of query aligns to 1:534/537 of 8pejA
6tbfA Structure of a beta galactosidase with inhibitor (see paper)
55% identity, 94% coverage: 34:549/549 of query aligns to 2:535/538 of 6tbfA
5jawA Structure of a beta galactosidase with inhibitor (see paper)
55% identity, 94% coverage: 34:549/549 of query aligns to 1:534/537 of 5jawA
6tbhA Structure of a beta galactosidase with inhibitor (see paper)
55% identity, 94% coverage: 34:549/549 of query aligns to 2:536/539 of 6tbhA
6tbiA Structure of a beta galactosidase with inhibitor (see paper)
55% identity, 94% coverage: 34:549/549 of query aligns to 2:537/540 of 6tbiA
4d1jD The structure of the gh35 beta-galactosidase bgl35a from cellvibrio japonicas in complex with 1-deoxygalactonojirimycin (see paper)
55% identity, 94% coverage: 34:549/549 of query aligns to 2:537/540 of 4d1jD
6tbkA Structure of a beta galactosidase with inhibitor (see paper)
56% identity, 94% coverage: 34:549/549 of query aligns to 1:524/527 of 6tbkA
8z48C Beta-galactosidase from bacteroides xylanisolvens (complex with methyl beta-galactopyranose)
33% identity, 90% coverage: 36:529/549 of query aligns to 1:477/505 of 8z48C
8z47A Beta-galactosidase from bacteroides xylanisolvens (ligand-free)
33% identity, 90% coverage: 36:529/549 of query aligns to 1:477/503 of 8z47A
>CCNA_00830 FitnessBrowser__Caulo:CCNA_00830
MEEAMGMSRFATAVGLALALVCGPLASGAHAADAAMPQLVTKDGRHALMVDGAPFLMLAA
QVNNSSAWPSQMAKVWPAIEKVGANTVQVPIAWEQIEPVEGQFDFSYLDLLLEQARERKV
RLVLLWFGTWKNSSPSYAPEWVKLDDKRFPRLIKDDGERSYSMSPLAKSTLDADRKAFVA
LMTHLKAKDAAQKTVIMVQVENETGTYGSVRDFGPAAQKVFNGPAPATLVKAVGAKPGTW
SQAFGKDADEFFHAWHIGRFVDQVAAGGKAVYPLPMYVNAALRDPIKPGDPKTYSAGGPT
DNVIGVWQAAAPSIDLIAPDIYMKESVKYEAVLGHYARPNNALFVAETGNDPAYARYVFS
TLGKQGIGWSPFGMDYTGYGNYPLGAAKVDEALIEVFAANYRLLAPMARELARLSFEGKV
WGGAEPDDRAAQTTTMGDWTVSLRYGKWQFGASDWTWLKDRPPGPQGPEGGGLVAQLSPN
EFLVTGRNVRVEFGRATADGKPMMMARVEEGHFENGQWVFDRLWNGDQTDYGLNFTGGSQ
ILRVKLATY
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory