SitesBLAST
Comparing CCNA_02353 FitnessBrowser__Caulo:CCNA_02353 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
8gy3B Cryo-em structure of membrane-bound aldehyde dehydrogenase from gluconobacter oxydans
53% identity, 99% coverage: 1:153/154 of query aligns to 1:152/154 of 8gy3B
- binding fe2/s2 (inorganic) cluster: G38 (= G38), C39 (= C39), G40 (= G40), G42 (≠ A42), C44 (= C44), G45 (= G45), C47 (= C47), C59 (= C59), C97 (= C98), C100 (= C101), Q101 (= Q102), C132 (= C133), C134 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q96 (= Q97), C134 (= C135)
1sb3C Structure of 4-hydroxybenzoyl-coa reductase from thauera aromatica (see paper)
44% identity, 95% coverage: 3:149/154 of query aligns to 5:151/161 of 1sb3C
- binding fe2/s2 (inorganic) cluster: Q39 (≠ Y37), C41 (= C39), G44 (≠ A42), C46 (= C44), G47 (= G45), C49 (= C47), C61 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C135 (= C133), C137 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q99 (= Q97), C137 (= C135)
3hrdD Crystal structure of nicotinate dehydrogenase (see paper)
42% identity, 96% coverage: 1:148/154 of query aligns to 4:151/160 of 3hrdD
- binding flavin-adenine dinucleotide: E44 (≠ A41), G45 (≠ A42), E46 (≠ L43)
- binding fe2/s2 (inorganic) cluster: E40 (≠ Y37), C42 (= C39), S43 (≠ G40), G45 (≠ A42), C47 (= C44), G48 (= G45), C50 (= C47), C62 (= C59), Q100 (= Q97), C101 (= C98), G102 (= G99), C104 (= C101), C136 (= C133), C138 (= C135)
- binding pterin cytosine dinucleotide: Q100 (= Q97), C138 (= C135)
Q0QLF3 Nicotinate dehydrogenase small FeS subunit; NDH; Nicotinic acid hydroxylase small FeS subunit; NAH; EC 1.17.1.5 from Eubacterium barkeri (Clostridium barkeri) (see paper)
42% identity, 96% coverage: 1:148/154 of query aligns to 4:151/157 of Q0QLF3
- C42 (= C39) binding
- C47 (= C44) binding
- C50 (= C47) binding
- C62 (= C59) binding
- C101 (= C98) binding
- C104 (= C101) binding
- C136 (= C133) binding
- C138 (= C135) binding
P77165 Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA; EC 1.2.99.6 from Escherichia coli (strain K12) (see paper)
41% identity, 97% coverage: 1:150/154 of query aligns to 61:225/229 of P77165
- C99 (= C39) binding
- C104 (= C44) binding
- G105 (= G45) binding
- C107 (= C47) binding
- C119 (= C59) binding
- C158 (= C98) binding
- C161 (= C101) binding
- C208 (= C133) binding
- C210 (= C135) binding
5g5gA Escherichia coli periplasmic aldehyde oxidase (see paper)
41% identity, 97% coverage: 1:150/154 of query aligns to 10:174/175 of 5g5gA
- binding fe2/s2 (inorganic) cluster: G47 (= G38), C48 (= C39), D49 (≠ G40), G51 (≠ A42), C53 (= C44), G54 (= G45), C56 (= C47), C68 (= C59), C107 (= C98), G108 (= G99), C110 (= C101), C157 (= C133), C159 (= C135)
1t3qA Crystal structure of quinoline 2-oxidoreductase from pseudomonas putida 86 (see paper)
36% identity, 100% coverage: 1:154/154 of query aligns to 4:157/162 of 1t3qA
- binding fe2/s2 (inorganic) cluster: I40 (≠ Y37), C42 (= C39), E43 (≠ G40), G45 (≠ A42), C47 (= C44), G48 (= G45), C50 (= C47), R60 (= R57), C62 (= C59), C101 (= C98), G102 (= G99), C104 (= C101), C136 (= C133), C138 (= C135)
- binding pterin cytosine dinucleotide: Q100 (= Q97), C138 (= C135)
4zohC Crystal structure of glyceraldehyde oxidoreductase (see paper)
41% identity, 94% coverage: 5:149/154 of query aligns to 14:157/161 of 4zohC
- binding fe2/s2 (inorganic) cluster: C47 (= C39), S50 (≠ A42), C52 (= C44), G53 (= G45), C55 (= C47), C67 (= C59), C106 (= C98), G107 (= G99), C109 (= C101), C141 (= C133), C143 (= C135)
- binding pterin cytosine dinucleotide: Q105 (= Q97), C143 (= C135)
P19921 Carbon monoxide dehydrogenase small chain; CO dehydrogenase subunit S; CO-DH S; EC 1.2.5.3 from Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) (Oligotropha carboxidovorans) (see 2 papers)
41% identity, 94% coverage: 5:149/154 of query aligns to 8:153/166 of P19921
- C42 (= C39) binding
- C47 (= C44) binding
- C50 (= C47) binding
- C62 (= C59) binding
- C102 (= C98) binding
- C105 (= C101) binding
- C137 (= C133) binding
- C139 (= C135) binding
1n5wA Crystal structure of the cu,mo-co dehydrogenase (codh); oxidized form (see paper)
41% identity, 94% coverage: 5:149/154 of query aligns to 6:151/161 of 1n5wA
- binding flavin-adenine dinucleotide: S43 (≠ A42), H44 (≠ L43)
- binding fe2/s2 (inorganic) cluster: I38 (≠ Y37), G39 (= G38), C40 (= C39), S43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), C60 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C135 (= C133), C137 (= C135)
1ffuD Carbon monoxide dehydrogenase from hydrogenophaga pseudoflava which lacks the mo-pyranopterin moiety of the molybdenum cofactor (see paper)
39% identity, 94% coverage: 5:149/154 of query aligns to 7:151/156 of 1ffuD
- binding fe2/s2 (inorganic) cluster: C41 (= C39), S44 (≠ A42), H45 (≠ L43), C46 (= C44), G47 (= G45), C49 (= C47), C61 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C135 (= C133), C137 (= C135)
1ffvA Carbon monoxide dehydrogenase from hydrogenophaga pseudoflava (see paper)
39% identity, 94% coverage: 5:149/154 of query aligns to 6:150/155 of 1ffvA
- binding fe2/s2 (inorganic) cluster: I38 (≠ Y37), C40 (= C39), S43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), C60 (= C59), C99 (= C98), G100 (= G99), C102 (= C101), C134 (= C133), C136 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q98 (= Q97), C136 (= C135)
5y6qA Crystal structure of an aldehyde oxidase from methylobacillus sp. Ky4400 (see paper)
41% identity, 97% coverage: 1:149/154 of query aligns to 3:152/157 of 5y6qA
- binding fe2/s2 (inorganic) cluster: G40 (= G38), C41 (= C39), D42 (≠ G40), G44 (≠ A42), C46 (= C44), G47 (= G45), C49 (= C47), C61 (= C59), C101 (= C98), G102 (= G99), C104 (= C101), C136 (= C133), C138 (= C135)
- binding pterin cytosine dinucleotide: Q100 (= Q97), C138 (= C135)
1n5wD Crystal structure of the cu,mo-co dehydrogenase (codh); oxidized form (see paper)
41% identity, 94% coverage: 5:149/154 of query aligns to 6:151/158 of 1n5wD
- binding flavin-adenine dinucleotide: S43 (≠ A42), H44 (≠ L43)
- binding fe2/s2 (inorganic) cluster: C40 (= C39), S43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), C60 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C135 (= C133), C137 (= C135)
- binding pterin cytosine dinucleotide: Q99 (= Q97), C137 (= C135)
4usaA Aldehyde oxidoreductase from desulfovibrio gigas (mop), soaked with trans-cinnamaldehyde (see paper)
42% identity, 95% coverage: 5:151/154 of query aligns to 6:155/907 of 4usaA
- binding fe2/s2 (inorganic) cluster: V38 (≠ Y37), C40 (= C39), E41 (≠ G40), G43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), R58 (= R57), C60 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C137 (= C133), C139 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q99 (= Q97), C139 (= C135)
Sites not aligning to the query:
- active site: 390, 425, 501, 505, 533, 869, 870
- binding bicarbonate ion: 460, 531, 532, 535, 539
- binding hydrocinnamic acid: 255, 425, 494, 497, 535, 626
- binding magnesium ion: 899, 903
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): 420, 421, 422, 533, 650, 653, 654, 655, 656, 695, 696, 697, 700, 701, 799, 800, 804, 807, 865, 866, 867, 868, 869
4us9A Aldehyde oxidoreductase from desulfovibrio gigas (mop), soaked with 3- phenylpropionaldehyde (see paper)
42% identity, 95% coverage: 5:151/154 of query aligns to 6:155/907 of 4us9A
- binding fe2/s2 (inorganic) cluster: V38 (≠ Y37), C40 (= C39), E41 (≠ G40), G43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), R58 (= R57), C60 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C137 (= C133), C139 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q99 (= Q97), C139 (= C135)
Sites not aligning to the query:
- active site: 390, 425, 501, 505, 533, 869, 870
- binding 3-phenylpropanal: 255, 257, 258, 752
- binding bicarbonate ion: 460, 498, 531, 532, 535, 539, 890, 892
- binding magnesium ion: 899, 903
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): 420, 421, 422, 533, 650, 653, 654, 655, 656, 695, 696, 697, 700, 701, 799, 800, 804, 807, 865, 866, 867, 868, 869
4us8A Aldehyde oxidoreductase from desulfovibrio gigas (mop), soaked with benzaldehyde (see paper)
42% identity, 95% coverage: 5:151/154 of query aligns to 6:155/907 of 4us8A
- binding fe2/s2 (inorganic) cluster: V38 (≠ Y37), C40 (= C39), E41 (≠ G40), G43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), R58 (= R57), C60 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C137 (= C133), C139 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q99 (= Q97), C139 (= C135)
Sites not aligning to the query:
- active site: 390, 425, 501, 505, 533, 869, 870
- binding bicarbonate ion: 460, 498, 531, 532, 535, 539
- binding benzaldehyde: 255, 255, 394, 425, 425, 425, 425, 497, 497, 501, 531, 535, 535, 626, 626, 626, 694, 696, 697
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): 420, 421, 422, 533, 653, 654, 655, 656, 695, 696, 697, 700, 701, 799, 800, 804, 807, 865, 866, 867, 868, 869
4c7yA Aldehyde oxidoreductase from desulfovibrio gigas (mop), soaked with sodium dithionite and sodium sulfide (see paper)
42% identity, 95% coverage: 5:151/154 of query aligns to 6:155/907 of 4c7yA
- binding fe2/s2 (inorganic) cluster: C40 (= C39), E41 (≠ G40), G43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), R58 (= R57), C60 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C137 (= C133), C139 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q99 (= Q97), C139 (= C135)
Sites not aligning to the query:
- active site: 390, 425, 501, 505, 533, 869, 870
- binding bicarbonate ion: 460, 498, 531, 535, 539
- binding magnesium ion: 899, 903
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): 420, 421, 422, 533, 650, 653, 654, 655, 656, 695, 696, 700, 701, 799, 800, 804, 807, 865, 866, 867, 868, 869
- binding hydrogen peroxide: 696, 697, 869
3fc4A Ethylene glycol inhibited form of aldehyde oxidoreductase from desulfovibrio gigas (see paper)
42% identity, 95% coverage: 5:151/154 of query aligns to 6:155/907 of 3fc4A
- binding fe2/s2 (inorganic) cluster: V38 (≠ Y37), C40 (= C39), E41 (≠ G40), G43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), R58 (= R57), C60 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C137 (= C133), C139 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q99 (= Q97), C139 (= C135)
Sites not aligning to the query:
- active site: 390, 425, 501, 505, 533, 869, 870
- binding 1,2-ethanediol: 535, 622, 696, 697, 869
- binding magnesium ion: 899, 903
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): 419, 420, 421, 422, 533, 650, 653, 654, 655, 656, 695, 696, 700, 701, 799, 800, 804, 807, 865, 866, 867, 868, 869
3fahA Glycerol inhibited form of aldehyde oxidoreductase from desulfovibrio gigas (see paper)
42% identity, 95% coverage: 5:151/154 of query aligns to 6:155/907 of 3fahA
- binding fe2/s2 (inorganic) cluster: V38 (≠ Y37), C40 (= C39), E41 (≠ G40), G43 (≠ A42), C45 (= C44), G46 (= G45), C48 (= C47), R58 (= R57), C60 (= C59), C100 (= C98), G101 (= G99), C103 (= C101), C137 (= C133), C139 (= C135)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): Q99 (= Q97), C139 (= C135)
Sites not aligning to the query:
- active site: 390, 425, 501, 505, 533, 869, 870
- binding glycerol: 416, 535, 622, 683, 696, 697, 869, 884, 889, 890, 892
- binding magnesium ion: 899, 903
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): 419, 420, 421, 422, 533, 650, 653, 654, 655, 656, 695, 696, 700, 701, 799, 800, 804, 807, 865, 866, 867, 868, 869
Query Sequence
>CCNA_02353 FitnessBrowser__Caulo:CCNA_02353
MAFNLTVNGESRIADVDGDTPLLWVLRDTLGLVGTKYGCGAALCGACTVHLDGVPVRACV
TPISGVGEQKVTTIEGVGKTTVGAKVQAAWKAVDTPQCGYCQAGQIMSATALLATTPKPT
DEEIDAAMNGNLCRCATYIRIKKAIKVAAGLEKA
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory