Comparing CCNA_02891 FitnessBrowser__Caulo:CCNA_02891 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 10 hits to proteins with known functional sites (download)
7kmoA Crystal structure of the gh35 beta-galactosidase (xac1772) from xanthomonas citri in complex with galactose
37% identity, 81% coverage: 123:628/628 of query aligns to 2:511/511 of 7kmoA
6tbjA Structure of a beta galactosidase with inhibitor (see paper)
35% identity, 80% coverage: 123:627/628 of query aligns to 2:522/525 of 6tbjA
6tbiA Structure of a beta galactosidase with inhibitor (see paper)
35% identity, 81% coverage: 121:627/628 of query aligns to 1:537/540 of 6tbiA
4d1jD The structure of the gh35 beta-galactosidase bgl35a from cellvibrio japonicas in complex with 1-deoxygalactonojirimycin (see paper)
35% identity, 81% coverage: 121:627/628 of query aligns to 1:537/540 of 4d1jD
6tbgA Structure of a beta galactosidase with inhibitor (see paper)
34% identity, 80% coverage: 123:627/628 of query aligns to 2:532/535 of 6tbgA
6tbkA Structure of a beta galactosidase with inhibitor (see paper)
35% identity, 80% coverage: 123:627/628 of query aligns to 2:524/527 of 6tbkA
6tbfA Structure of a beta galactosidase with inhibitor (see paper)
35% identity, 81% coverage: 121:627/628 of query aligns to 1:535/538 of 6tbfA
6tbhA Structure of a beta galactosidase with inhibitor (see paper)
35% identity, 81% coverage: 121:627/628 of query aligns to 1:536/539 of 6tbhA
8pejA Cjgh35 with a galactosidase activity-based probe (see paper)
35% identity, 80% coverage: 123:627/628 of query aligns to 2:534/537 of 8pejA
5jawA Structure of a beta galactosidase with inhibitor (see paper)
35% identity, 80% coverage: 123:627/628 of query aligns to 2:534/537 of 5jawA
>CCNA_02891 FitnessBrowser__Caulo:CCNA_02891
MPGPRSNPLPFRKRTDLKARTPQTPRMNLGPGIGFAALTCRRGGRGIGMLSGSGHEHGAC
PGGIVSPPQNAPQIPLTISARPATFDIDLTSEPRSSDLTMHRLTPALAALLLGLAATSAH
AEPAPRIAKIDGVQRLLVNDKPYLILGGELGNSSSSDLKDLSGHWAVMKAANLNTVLAPV
AWEQVEPVEGKFDFTVLDGMIQQARAHEMRLVLLWFGAWKNSMSTYTPAWVKRDPARFPY
ARTGEGKAVEILSASYPATRDADAKAFAAMMAHLKAVDGDKRTVLMVQVENEIGMLPEAR
DRTKAAEADFNKPVPAAALKVLSGQIKGKKAGTWEEVFGASLATDELWQAWTFGRYVEAL
AAAGKKAYDLPMFVNAALPRPGAVPGGYPSAGPLPHLIDLWRAAAPSLDMLSPDIYYPNF
TEWMPPYDRPDQPLFIPEADQAGKTPAPGNAFWAIGEHDAIGFSPFSIEHLPPEGVKTLG
AAYRLLDQLTPLITTHDGGKTMRGFRAPVAYDGTVDLTPRKASFGPWDFTVTVVDPWTPK
DKQDYAAHGGLVIQTGADEFIVAGRGITMTFATKDGSVGLETVRELRFENGQWVDGRWLN
GDQTHQGRHIRLPPTEFGVQRVRLYRYQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory