Comparing CCNA_03028 FitnessBrowser__Caulo:CCNA_03028 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
6vh5D Crystal structure of prephenate dehydratase from brucella melitensis biovar abortus 2308 in complex with phenylalanine
58% identity, 97% coverage: 5:279/283 of query aligns to 7:282/282 of 6vh5D
7am0B Gqqa- a novel type of quorum quenching acylases (see paper)
49% identity, 98% coverage: 5:281/283 of query aligns to 2:277/278 of 7am0B
2qmxA The crystal structure of l-phe inhibited prephenate dehydratase from chlorobium tepidum tls (see paper)
36% identity, 94% coverage: 7:273/283 of query aligns to 4:273/278 of 2qmxA
7alzA Gqqa- a novel type of quorum quenching acylases (see paper)
59% identity, 39% coverage: 171:281/283 of query aligns to 84:193/194 of 7alzA
P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli (strain K12)
30% identity, 96% coverage: 6:276/283 of query aligns to 105:378/386 of P0A9J8
Sites not aligning to the query:
3mwbA The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
35% identity, 87% coverage: 27:273/283 of query aligns to 25:274/306 of 3mwbA
3mwbB The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
35% identity, 87% coverage: 27:273/283 of query aligns to 25:271/303 of 3mwbB
3luyA Putative chorismate mutase from bifidobacterium adolescentis
22% identity, 95% coverage: 5:274/283 of query aligns to 4:284/326 of 3luyA
>CCNA_03028 FitnessBrowser__Caulo:CCNA_03028
MSLLKKIAFQGEPGANSHEACRTYFPDYEAYPCKTFEEAFEAIKSGVAQLGMIPIENSIA
GRVADVHHLLPASGLKIIGERFKPIRFQLMANKGVKLEDIKVVSSMPIALSQCRNSLKRL
GVETEAAGDTAGAAKALALKPNPTHAAVAPALAAEIYGLDILARDIEDERHNTTRFLVMT
ADKAPAAPDFTHRCVTSFVFRVRNLPAALYKALGGFATNGVNMTKLESYMEGGNFTATFF
YAEVDGRPEDRNLALALDELKFFSERFEILGVYPADPFRDRGA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory