SitesBLAST
Comparing CCNA_03322 FitnessBrowser__Caulo:CCNA_03322 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
3ddnB Crystal structure of hydroxypyruvic acid phosphate bound d-3- phosphoglycerate dehydrogenase in mycobacterium tuberculosis (see paper)
41% identity, 95% coverage: 4:505/526 of query aligns to 3:504/525 of 3ddnB
O43175 D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens (Human) (see 3 papers)
38% identity, 99% coverage: 5:526/526 of query aligns to 8:533/533 of O43175
- T78 (≠ I75) binding NAD(+)
- R135 (≠ K132) to W: in PHGDHD; results in a 2-fold decrease in enzyme activity with 3-phosphohydroxypyruvate, but no change in substrate affinity; dbSNP:rs267606949
- RI 155:156 (≠ NI 152:153) binding NAD(+)
- D175 (= D172) binding NAD(+)
- T207 (= T204) binding NAD(+)
- CAR 234:236 (= CAR 231:233) binding NAD(+)
- D260 (= D257) binding NAD(+)
- V261 (= V258) to M: in PHGDHD; results in a four-fold decrease in substrate affinity and a slight increase in maximal enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs267606947
- HLGA 283:286 (= HLGA 280:283) binding NAD(+)
- A373 (= A370) to T: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs201553627
- G377 (= G374) to S: in PHGDHD; results in a 2-fold decrease in enzyme activity with 3-phosphohydroxypyruvate, but no change in substrate affinity; dbSNP:rs267606948
- V425 (≠ T420) to M: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs121907988
- V490 (= V478) to M: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs121907987
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 2 modified: N-acetylalanine
3dc2A Crystal structure of serine bound d-3-phosphoglycerate dehydrogenase from mycobacterium tuberculosis (see paper)
40% identity, 95% coverage: 4:505/526 of query aligns to 2:505/526 of 3dc2A
- active site: N96 (= N99), R230 (= R233), D254 (= D257), E259 (= E262), H277 (= H280)
- binding serine: Y458 (≠ N459), D460 (= D461), R461 (≠ K462), P462 (= P463), G463 (= G464), A464 (≠ F465), L465 (≠ I466), L484 (= L485)
7dkmA Phgdh covalently linked to oridonin (see paper)
49% identity, 57% coverage: 5:304/526 of query aligns to 4:303/306 of 7dkmA
- binding nicotinamide-adenine-dinucleotide: T74 (≠ I75), A102 (≠ T103), G148 (= G149), R151 (≠ N152), I152 (= I153), Y170 (= Y171), D171 (= D172), P172 (= P173), I173 (≠ F174), H202 (= H203), T203 (= T204), P204 (= P205), T209 (= T210), C230 (= C231), A231 (= A232), R232 (= R233), H279 (= H280), G281 (= G282)
- binding (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one: C14 (≠ A15), K17 (≠ E18), I18 (= I19), E293 (≠ L294)
6plgA Crystal structure of human phgdh complexed with compound 15 (see paper)
49% identity, 57% coverage: 5:304/526 of query aligns to 3:302/303 of 6plgA
6cwaA Crystal structure phgdh in complex with nadh and 3-phosphoglycerate at 1.77 a resolution (see paper)
50% identity, 57% coverage: 5:302/526 of query aligns to 2:299/299 of 6cwaA
- binding 1,4-dihydronicotinamide adenine dinucleotide: N96 (= N99), A100 (≠ T103), R149 (≠ N152), I150 (= I153), Y168 (= Y171), D169 (= D172), P170 (= P173), I171 (≠ F174), H200 (= H203), T201 (= T204), P202 (= P205), T207 (= T210), C228 (= C231), A229 (= A232), R230 (= R233), H277 (= H280), G279 (= G282)
7ewhA Crystal structure of human phgdh in complex with homoharringtonine (see paper)
49% identity, 57% coverage: 5:304/526 of query aligns to 3:302/302 of 7ewhA
- binding (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine: L146 (≠ I148), G147 (= G149), L148 (≠ A150), G149 (= G151), R150 (≠ N152), I151 (= I153), G152 (= G154), D170 (= D172), H201 (= H203), T202 (= T204), P203 (= P205)
6rihA Crystal structure of phgdh in complex with compound 9 (see paper)
49% identity, 57% coverage: 5:304/526 of query aligns to 3:302/302 of 6rihA
6rj5A Crystal structure of phgdh in complex with compound 39 (see paper)
50% identity, 57% coverage: 5:302/526 of query aligns to 3:300/301 of 6rj5A
6plfA Crystal structure of human phgdh complexed with compound 1 (see paper)
49% identity, 57% coverage: 5:304/526 of query aligns to 4:303/305 of 6plfA
6rj2A Crystal structure of phgdh in complex with compound 40 (see paper)
49% identity, 57% coverage: 6:304/526 of query aligns to 1:299/299 of 6rj2A
- binding ~{N}-[(1~{R})-1-[4-(ethanoylsulfamoyl)phenyl]ethyl]-2-methyl-5-phenyl-pyrazole-3-carboxamide: G146 (= G151), I148 (= I153), Y166 (= Y171), D167 (= D172), P168 (= P173), I169 (≠ F174), I170 (≠ L175), H198 (= H203), T199 (= T204), L208 (≠ I213), R228 (= R233)
6rj3A Crystal structure of phgdh in complex with compound 15 (see paper)
50% identity, 56% coverage: 5:299/526 of query aligns to 2:296/297 of 6rj3A
6plfB Crystal structure of human phgdh complexed with compound 1 (see paper)
49% identity, 57% coverage: 5:302/526 of query aligns to 2:291/292 of 6plfB