Comparing Dsui_0443 FitnessBrowser__PS:Dsui_0443 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q9KVT3 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
57% identity, 99% coverage: 3:271/271 of query aligns to 6:273/278 of Q9KVT3
3pgjA 2.49 angstrom resolution crystal structure of shikimate 5- dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate
57% identity, 99% coverage: 3:271/271 of query aligns to 2:269/272 of 3pgjA
3sefA 2.4 angstrom resolution crystal structure of shikimate 5-dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate and NADPH
57% identity, 99% coverage: 3:271/271 of query aligns to 2:265/268 of 3sefA
1nytA Shikimate dehydrogenase aroe complexed with NADP+ (see paper)
53% identity, 99% coverage: 3:270/271 of query aligns to 2:268/271 of 1nytA
P15770 Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Escherichia coli (strain K12) (see paper)
53% identity, 99% coverage: 3:270/271 of query aligns to 2:268/272 of P15770
3sefC 2.4 angstrom resolution crystal structure of shikimate 5-dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate and NADPH
53% identity, 99% coverage: 3:271/271 of query aligns to 2:242/244 of 3sefC
P43876 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see paper)
46% identity, 99% coverage: 3:270/271 of query aligns to 2:269/272 of P43876
1p77A Crystal structure of shikimate dehydrogenase (aroe) from haemophilus influenzae (see paper)
46% identity, 99% coverage: 3:270/271 of query aligns to 2:262/265 of 1p77A
3phiA Shikimate 5-dehydrogenase (aroe) from helicobacter pylori in complex with shikimate and NADPH
38% identity, 98% coverage: 5:269/271 of query aligns to 6:257/259 of 3phiA
P56119 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
38% identity, 98% coverage: 5:269/271 of query aligns to 6:260/263 of P56119
4fosA Crystal structure of shikimate dehydrogenase (aroe) q237a mutant from helicobacter pylori in complex with shikimate
38% identity, 98% coverage: 5:269/271 of query aligns to 6:260/263 of 4fosA
Q5HNV1 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (see paper)
33% identity, 94% coverage: 4:259/271 of query aligns to 2:252/269 of Q5HNV1
3dooA Crystal structure of shikimate dehydrogenase from staphylococcus epidermidis complexed with shikimate (see paper)
32% identity, 94% coverage: 4:259/271 of query aligns to 2:243/258 of 3dooA
3phjA Shikimate 5-dehydrogenase (aroe) from helicobacter pylori in complex with 3-dehydroshikimate
37% identity, 98% coverage: 5:269/271 of query aligns to 6:252/255 of 3phjA
2hk9B Crystal structure of shikimate dehydrogenase from aquifex aeolicus in complex with shikimate and NADP+ at 2.2 angstrom resolution (see paper)
37% identity, 94% coverage: 2:256/271 of query aligns to 6:252/267 of 2hk9B
2hk9A Crystal structure of shikimate dehydrogenase from aquifex aeolicus in complex with shikimate and NADP+ at 2.2 angstrom resolution (see paper)
37% identity, 94% coverage: 2:256/271 of query aligns to 6:252/269 of 2hk9A
O67049 Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Aquifex aeolicus (strain VF5) (see paper)
37% identity, 94% coverage: 2:256/271 of query aligns to 6:252/269 of O67049
2ev9B Crystal structure of shikimate 5-dehydrogenase (aroe) from thermus thermophilus hb8 in complex with NADP(h) and shikimate (see paper)
37% identity, 94% coverage: 4:259/271 of query aligns to 3:248/263 of 2ev9B
Q5SJF8 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
37% identity, 94% coverage: 4:259/271 of query aligns to 3:248/263 of Q5SJF8
2cy0A Crystal structure of shikimate 5-dehydrogenase (aroe) from thermus thermophilus hb8 in complex with NADP (see paper)
37% identity, 94% coverage: 4:259/271 of query aligns to 3:248/262 of 2cy0A
>Dsui_0443 FitnessBrowser__PS:Dsui_0443
MTDRYAVFGNPIGHSKSPLIHSLFAVACAQDMSYEALLAPLDGFAAALRAFADGGGRGAN
VTVPFKEEAFRLADSLTPRAARAGAVNTLVLEGGRILGDNTDGAGLVQDLQVNQSLPLAG
KAILLLGAGGASRGALAPLLAAGPCRLHIANRTAAKAADLARDFADLGPVSGGGYGELAG
QGFDVVINATSASLAGELPPLPPGIFNGGALAYDMMYGRGETPFLAFARLEGATHLVDGL
GMLVEQAAEAFQLWRGVRPATAPVLDRLRQG
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Lawrence Berkeley National Laboratory