Comparing Dsui_1516 FitnessBrowser__PS:Dsui_1516 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
1l7nA Transition state analogue of phosphoserine phosphatase (aluminum fluoride complex) (see paper)
24% identity, 95% coverage: 3:210/220 of query aligns to 5:193/209 of 1l7nA
1f5sA Crystal structure of phosphoserine phosphatase from methanococcus jannaschii (see paper)
24% identity, 95% coverage: 3:210/220 of query aligns to 6:194/210 of 1f5sA
Q58989 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 3 papers)
24% identity, 95% coverage: 3:210/220 of query aligns to 7:195/211 of Q58989
1l7pA Substrate bound phosphoserine phosphatase complex structure (see paper)
23% identity, 95% coverage: 3:210/220 of query aligns to 4:192/208 of 1l7pA
1l7oA Crystal structure of phosphoserine phosphatase in apo form (see paper)
23% identity, 95% coverage: 3:210/220 of query aligns to 4:184/200 of 1l7oA
Sites not aligning to the query:
>Dsui_1516 FitnessBrowser__PS:Dsui_1516
MNLALFDLDNTLLAGDSDFEWAQFLIGQGALDGEIHAAQNEKFYEQYKAGTLDIYEFLDF
QLKPLARHSRAQLDAWHQEFMARNIRPIMTDQARAKVQEHLQRGDLVLLVTATNAFVTGP
IAREFGIHHLIATIPEQRDGQFTGGVRGTPSFQDGKITRVEDWLEAQGLNWGSFADSWFY
SDSRNDLPLLEKVSCPVAVDPDPILKAEAERRGWPVISLR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory