Comparing Dsui_2329 FitnessBrowser__PS:Dsui_2329 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 5 hits to proteins with known functional sites (download)
3dmeA Crystal structure of conserved exported protein from bordetella pertussis. Northeast structural genomics target ber141
59% identity, 97% coverage: 8:371/375 of query aligns to 6:365/366 of 3dmeA
8w78A Structure of drosophila melanogaster l-2-hydroxyglutarate dehydrogenase in complex with fad and 2-oxoglutarate (see paper)
28% identity, 94% coverage: 18:371/375 of query aligns to 16:403/410 of 8w78A
Sites not aligning to the query:
8w7fB Structure of drosophila melanogaster l-2-hydroxyglutarate dehydrogenase bound with fad and a sulfate ion (see paper)
27% identity, 94% coverage: 18:371/375 of query aligns to 16:405/412 of 8w7fB
Sites not aligning to the query:
4x9mA Oxidized l-alpha-glycerophosphate oxidase from mycoplasma pneumoniae with fad bound (see paper)
25% identity, 97% coverage: 3:367/375 of query aligns to 2:362/384 of 4x9mA
P75063 Glycerol 3-phosphate oxidase; GlpO; L-alpha-glycerophosphate oxidase; EC 1.1.3.21 from Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) (Mycoplasmoides pneumoniae) (see paper)
25% identity, 97% coverage: 3:367/375 of query aligns to 2:362/384 of P75063
>Dsui_2329 FitnessBrowser__PS:Dsui_2329
MTERTGAVVIGAGVVGLACARELARRGIDTVMVEKNAAFGQETSARNSEVIHAGLYYPSG
SHKAALCLRGRELLYAFCRTHQVAHRACGKLIVATSAAQEAGLDALQRQGEANGVTDLRR
LDAAQARVLEPALRCSAALLSPATGIVDSHGFMLALLGEAESAGAVLALRSPFRGARRHG
GLWRISIGGEAPLELDTAILINAAGLHATQVAAGIEGLAPTAIPPAHYAKGNYYSLAGRA
PFSRLVYPLPEPGGLGVHLTLDLGGQARFGPDVEWLATRDPQALDYRVDPRRADAFYAEV
RRYWPQLADNALQPAYSGVRPKISGPGATAADFCLQGPEQHGLAGLINLFGIESPGLTAS
LAIAEAVAAQLPGLH
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory