Comparing Echvi_0221 FitnessBrowser__Cola:Echvi_0221 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
7bw9A Crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica
41% identity, 79% coverage: 31:251/280 of query aligns to 38:252/280 of 7bw9A
3p47A Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine (see paper)
38% identity, 84% coverage: 25:258/280 of query aligns to 34:269/270 of 3p47A
3q1xA Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-serine (see paper)
38% identity, 84% coverage: 25:258/280 of query aligns to 32:267/267 of 3q1xA
4n69A Soybean serine acetyltransferase complexed with serine (see paper)
40% identity, 59% coverage: 100:263/280 of query aligns to 83:242/243 of 4n69A
6wyeA Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) (see paper)
36% identity, 58% coverage: 91:252/280 of query aligns to 76:232/261 of 6wyeA
7ra4A Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine (see paper)
36% identity, 58% coverage: 91:252/280 of query aligns to 74:230/243 of 7ra4A
1ssqD Serine acetyltransferase- complex with cysteine (see paper)
38% identity, 57% coverage: 93:252/280 of query aligns to 73:227/257 of 1ssqD
4hzdA Crystal structure of serine acetyltransferase in complex with coenzyme a from brucella abortus strain s19 (see paper)
39% identity, 55% coverage: 100:252/280 of query aligns to 84:231/250 of 4hzdA
Sites not aligning to the query:
8i04A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with serine (see paper)
39% identity, 55% coverage: 100:252/280 of query aligns to 80:227/258 of 8i04A
8i09A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with butyl gallate (see paper)
39% identity, 55% coverage: 100:252/280 of query aligns to 83:230/246 of 8i09A
Sites not aligning to the query:
8i06A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with coa (see paper)
39% identity, 55% coverage: 100:252/280 of query aligns to 84:231/244 of 8i06A
Sites not aligning to the query:
1t3dA Crystal structure of serine acetyltransferase from e.Coli at 2.2a (see paper)
39% identity, 55% coverage: 100:252/280 of query aligns to 84:231/262 of 1t3dA
4n6bA Soybean serine acetyltransferase complexed with coa (see paper)
37% identity, 59% coverage: 100:263/280 of query aligns to 79:232/233 of 4n6bA
3gvdI Crystal structure of serine acetyltransferase cyse from yersinia pestis
38% identity, 56% coverage: 99:255/280 of query aligns to 86:237/272 of 3gvdI
4h7oA Crystal structure of serine acetyltransferase from vibrio cholerae o1 biovar el tor n16961
36% identity, 59% coverage: 93:257/280 of query aligns to 73:232/258 of 4h7oA
Sites not aligning to the query:
1sstA Serine acetyltransferase- complex with coa (see paper)
35% identity, 58% coverage: 92:252/280 of query aligns to 72:220/233 of 1sstA
Sites not aligning to the query:
>Echvi_0221 FitnessBrowser__Cola:Echvi_0221
MEYRKSFIKKIHDSHKQCPGCPSPRKVQEFFEGVLGVLFPEYAVKILKDTQEIEDKLKYY
EVQLQGILGKNKRLIDEESEAVAAAFFDRLSDVYDAIHEDIQAMFEGDPAAKSTTEVIRS
YPGFYAIAAYRIAHLLQEQGVSLIPRMITEFAHSKTGIDIHPGASIGRFFCIDHGTGVVI
GETTKIGDHVKLYQGVTLGALSVNKEDADIQRHPTIGDHVVIYAGATILGGKTVIGPESV
IGGNVWLTKSIPAKSKIYYQTKMYDASAETTDMYVFKNDA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory