Comparing Echvi_1094 FitnessBrowser__Cola:Echvi_1094 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
8gxkB Pseudomonas jinjuensis n-acetyltransferase (see paper)
39% identity, 92% coverage: 8:191/200 of query aligns to 5:182/188 of 8gxkB
1yreB Hypothetical protein pa3270 from pseudomonas aeruginosa in complex with coa
36% identity, 92% coverage: 8:191/200 of query aligns to 5:182/187 of 1yreB
8gxfB Pseudomonas flexibilis gcn5 family acetyltransferase (see paper)
33% identity, 95% coverage: 8:196/200 of query aligns to 5:187/187 of 8gxfB
>Echvi_1094 FitnessBrowser__Cola:Echvi_1094
MENHWLTPLTLKGEKVTLVPLQQAHRDGLIEAAADGKLWELWYTSVPSPETMDQYIEQAL
QQQAASTSLPFVIIDNASEKVVGCTRYCNAEAKHKRLEIGFTWYAKSVQRTGLNRECKYL
LLQHAFEKLDFICVQFKTDWFNLPSRNAIAKLGAKQDGILRNDRLNADGTYRDTVVFSII
QQEWHGVKKNLSYRMNHFIG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory