Comparing Echvi_1845 FitnessBrowser__Cola:Echvi_1845 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
P0AFF4 Nucleoside permease NupG; Nucleoside-transport system protein NupG from Escherichia coli (strain K12) (see paper)
30% identity, 98% coverage: 4:404/410 of query aligns to 2:406/418 of P0AFF4
>Echvi_1845 FitnessBrowser__Cola:Echvi_1845
MSFNTKFKLSFMMFLEFFIWGGWFVTLGLFLGNNLGTNGAQDAAVFSTQSLGAIIAPFII
GLIADKYFNAERILGILHLIGAVLMYLMYTATDFESFYPYVFAYMVAYMPTLALVNSVSF
NQMSNPEKEFGVIRVWGTIGWIVAGLVISLVFAWDSTENAAAGMLKYTFLMTCIASLVLG
VYSFMLPKTPPKIAKGEKKSISEILGLDAFTLLKDRNYLVFFLSSVLICIPLAFYYQNAS
KFFGEIGMTNLTSKMALGQGSEVLFMLLLPIFFGKFGVKKTLLVGMLAWVVRYALFAFGN
VGELSFMLLTGIALHGICYDFFFVSGQIYTDSKAGEKFKSAAQGMITLATYGVGMLIGFW
VAGWAYDTYEMSDKVHDWKTIWLIPSGIAVLVALIFAVAFKQKKTTPVEA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory