Comparing Echvi_2860 FitnessBrowser__Cola:Echvi_2860 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3ph4A Clostridium thermocellum ribose-5-phosphate isomerase b with d-allose (see paper)
43% identity, 99% coverage: 1:149/151 of query aligns to 1:147/148 of 3ph4A
3ph3A Clostridium thermocellum ribose-5-phosphate isomerase b with d-ribose (see paper)
43% identity, 99% coverage: 1:149/151 of query aligns to 1:147/148 of 3ph3A
3heeA Structural study of clostridium thermocellum ribose-5-phosphate isomerase b and ribose-5-phosphate (see paper)
43% identity, 99% coverage: 1:149/151 of query aligns to 1:147/148 of 3heeA
P37351 Ribose-5-phosphate isomerase B; Phosphoriboisomerase B; EC 5.3.1.6 from Escherichia coli (strain K12) (see paper)
39% identity, 97% coverage: 2:148/151 of query aligns to 3:147/149 of P37351
3k8cA Complex of trypanosoma cruzi ribose 5-phosphate isomerase type b with 4-deoxy-4-phospho-d-erythronohydroxamic acid (see paper)
36% identity, 96% coverage: 2:146/151 of query aligns to 4:149/152 of 3k8cA
3k7sA Complex of trypanosoma cruzi ribose 5-phosphate isomerase type b with ribose 5-phosphate (see paper)
36% identity, 96% coverage: 2:146/151 of query aligns to 4:149/152 of 3k7sA
6mu0A Crystal structure of ribose-5-phosphate isomerase b from mycoplasma genitalium with bound ribulose-5-phosphate
41% identity, 98% coverage: 1:148/151 of query aligns to 4:151/152 of 6mu0A
2besC Structure of mycobacterium tuberculosis ribose-5-phosphate isomerase, rpib, rv2465c, in complex with 4-phospho-d-erythronohydroxamic acid. (see paper)
36% identity, 97% coverage: 1:147/151 of query aligns to 2:148/158 of 2besC
P9WKD7 Ribose-5-phosphate isomerase B; Phosphoriboisomerase B; EC 5.3.1.6 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 3 papers)
36% identity, 97% coverage: 1:147/151 of query aligns to 4:150/162 of P9WKD7
2vvqA Crystal structure of mycobacterium tuberculosis ribose-5-phosphate isomerase b in complex with the inhibitor 5-deoxy-5-phospho-d- ribonate (see paper)
36% identity, 97% coverage: 1:147/151 of query aligns to 2:148/156 of 2vvqA
2vvoA Crystal structure of mycobacterium tuberculosis ribose-5-phosphate isomerase b in complex with alpha d-allose 6-phosphate (see paper)
36% identity, 97% coverage: 1:147/151 of query aligns to 2:148/156 of 2vvoA
1uslA Structure of mycobacterium tuberculosis ribose-5-phosphate isomerase, rpib, rv2465c, complexed with phosphate. (see paper)
36% identity, 97% coverage: 1:147/151 of query aligns to 2:148/156 of 1uslA
2vvpA Crystal structure of mycobacterium tuberculosis ribose-5-phosphate isomerase b in complex with its substrates ribose 5-phosphate and ribulose 5-phosphate (see paper)
36% identity, 97% coverage: 1:147/151 of query aligns to 2:148/157 of 2vvpA
2betA Structure of mycobacterium tuberculosis ribose-5-phosphate isomerase, rpib, rv2465c, in complex with 4-phospho-d-erythronate. (see paper)
36% identity, 97% coverage: 1:147/151 of query aligns to 2:148/157 of 2betA
3k7pA Structure of mutant of ribose 5-phosphate isomerase type b from trypanosoma cruzi. (see paper)
36% identity, 96% coverage: 2:146/151 of query aligns to 4:149/153 of 3k7pA
3sgwA Crystal structure of ribose-5-phosphate isomerase b rpib from coccidioides immitis semi-covalently bound to malonic acid (see paper)
27% identity, 100% coverage: 1:151/151 of query aligns to 4:156/158 of 3sgwA
P0CL19 Putative ribose 5-phosphate isomerase; EC 5.3.1.- from Coccidioides immitis (strain RS) (Valley fever fungus) (see paper)
27% identity, 100% coverage: 1:151/151 of query aligns to 9:161/163 of P0CL19
4lfnB Crystal structure of d-galactose-6-phosphate isomerase in complex with d-ribulose (see paper)
32% identity, 96% coverage: 1:145/151 of query aligns to 1:144/172 of 4lfnB
4lfmB Crystal structure of d-galactose-6-phosphate isomerase in complex with d-psicose (see paper)
32% identity, 96% coverage: 1:145/151 of query aligns to 1:144/172 of 4lfmB
4lflB Crystal structure of d-galactose-6-phosphate isomerase in complex with d-tagatose-6-phosphate (see paper)
32% identity, 96% coverage: 1:145/151 of query aligns to 1:144/172 of 4lflB
>Echvi_2860 FitnessBrowser__Cola:Echvi_2860
MKIGIAADHGGFDQKQELYEYLKSNGHDVTDFGAFEFDESDDYPDKVKPLAIAVSKGEIQ
KGIAICGSGVGVTVAANKVPGVRAALITEPYSAHQGVEHDNMNLMCLGGRVMGGVVLKEL
VEIFITAEYVEKERFQRRLKKVQDLENEFLK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory