Comparing Echvi_2939 FitnessBrowser__Cola:Echvi_2939 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8gstC Crystal structure of l-2,4-diketo-3-deoxyrhamnonate hydrolase from sphingomonas sp. (Pyruvate bound-form) (see paper)
46% identity, 99% coverage: 2:284/285 of query aligns to 7:282/290 of 8gstC
8gsrA Crystal structure of l-2,4-diketo-3-deoxyrhamnonate hydrolase from sphingomonas sp. (Apo-form) (see paper)
46% identity, 99% coverage: 2:284/285 of query aligns to 7:282/290 of 8gsrA
6v77B Crystal structure of a putative hpce protein from mycobacterium smegmatis
41% identity, 81% coverage: 52:282/285 of query aligns to 47:277/279 of 6v77B
6iymA Fumarylacetoacetate hydrolase (eafah) from psychrophilic exiguobacterium antarcticum (see paper)
37% identity, 96% coverage: 1:274/285 of query aligns to 2:268/277 of 6iymA
3r6oA Crystal structure of a probable 2-hydroxyhepta-2,4-diene-1, 7- dioateisomerase from mycobacterium abscessus (see paper)
41% identity, 75% coverage: 64:277/285 of query aligns to 53:257/265 of 3r6oA
6j5xB Crystal structure of fumarylpyruvate hydrolase from corynebacterium glutamicum in complex with mn2+ and pyruvate (see paper)
35% identity, 93% coverage: 18:281/285 of query aligns to 7:277/280 of 6j5xB
6j5xA Crystal structure of fumarylpyruvate hydrolase from corynebacterium glutamicum in complex with mn2+ and pyruvate (see paper)
35% identity, 93% coverage: 18:281/285 of query aligns to 7:277/280 of 6j5xA
3qdfA Crystal structure of 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase from mycobacterium marinum (see paper)
42% identity, 75% coverage: 62:275/285 of query aligns to 51:242/252 of 3qdfA
6sbiA X-ray structure of murine fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) in complex with inhibitor oxalate (see paper)
40% identity, 72% coverage: 76:280/285 of query aligns to 14:213/216 of 6sbiA
6fogA X-ray structure of homo sapiens fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) in complex with inhibitor oxalate at 1.94a resolution. (see paper)
40% identity, 69% coverage: 76:273/285 of query aligns to 15:207/218 of 6fogA
Sites not aligning to the query:
Q6P587 Acylpyruvase FAHD1, mitochondrial; Fumarylacetoacetate hydrolase domain-containing protein 1; FAH domain-containing protein 1; Oxaloacetate decarboxylase; OAA decarboxylase; YisK-like protein; EC 3.7.1.5; EC 4.1.1.112 from Homo sapiens (Human) (see 3 papers)
40% identity, 69% coverage: 76:273/285 of query aligns to 20:212/224 of Q6P587
1gttA Crystal structure of hpce (see paper)
39% identity, 61% coverage: 76:250/285 of query aligns to 225:391/421 of 1gttA
4dbhA Crystal structure of cg1458 with inhibitor (see paper)
37% identity, 74% coverage: 63:274/285 of query aligns to 52:260/269 of 4dbhA
6jvwB Crystal structure of maleylpyruvate hydrolase from sphingobium sp. Syk-6 in complex with manganese (ii) ion and pyruvate (see paper)
36% identity, 78% coverage: 54:274/285 of query aligns to 53:254/264 of 6jvwB
3v77A Crystal structure of a putative fumarylacetoacetate isomerase/hydrolase from oleispira antarctica (see paper)
36% identity, 62% coverage: 75:251/285 of query aligns to 17:197/224 of 3v77A
6j5yA Crystal structure of fumarylpyruvate hydrolase from pseudomonas aeruginosa in complex with mn2+ and pyruvate (see paper)
30% identity, 75% coverage: 69:281/285 of query aligns to 22:231/233 of 6j5yA
1nkqA Crystal structure of yeast ynq8, a fumarylacetoacetate hydrolase family protein
33% identity, 69% coverage: 70:267/285 of query aligns to 5:219/247 of 1nkqA
3lzkC The crystal structure of a probably aromatic amino acid degradation protein from sinorhizobium meliloti 1021
29% identity, 59% coverage: 82:248/285 of query aligns to 96:272/343 of 3lzkC
Sites not aligning to the query:
2q1dX 2-keto-3-deoxy-d-arabinonate dehydratase complexed with magnesium and 2,5-dioxopentanoate (see paper)
28% identity, 75% coverage: 62:275/285 of query aligns to 63:271/281 of 2q1dX
3bqbX Hexagonal kristal form of 2-keto-3-deoxyarabinonate dehydratase (see paper)
30% identity, 63% coverage: 97:275/285 of query aligns to 112:281/291 of 3bqbX
>Echvi_2939 FitnessBrowser__Cola:Echvi_2939
MKLLRFGNPGEEKPGIEKANGIRIDCSAFGEDWTEDFLTQDGLNRLTTWLESNEAKCPEI
SSEVRLGPPIKRPSKIICIGLNYKLHAKETGAEVPKQPIIFMKSTTSLSGPNDDIIIPRN
SEKTDWEVELAVMIGKKASYVDKENAMDYVAGYCLLNDVSERDFQLSHGGQWVKGKSNDT
FSPLGPYLVTKDEIKDPQHLRLWLKHNGKMLQDSNTSDMVFDIPTLVSHLSNYMTLLPGD
IISTGTPSGVGMGLTPPTYLKEGDVVELGIDGLGTSRQKAVNYKG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory