Comparing Echvi_3057 FitnessBrowser__Cola:Echvi_3057 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P9WPD5 Citrate synthase 1; EC 2.3.3.16 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
59% identity, 100% coverage: 3:428/428 of query aligns to 6:431/431 of P9WPD5
1owbA Three dimensional structure analysis of the variant r109l nadh complex of type ii citrate synthase from e. Coli (see paper)
53% identity, 98% coverage: 5:424/428 of query aligns to 5:422/426 of 1owbA
P0ABH7 Citrate synthase; EC 2.3.3.16 from Escherichia coli (strain K12) (see 2 papers)
53% identity, 98% coverage: 5:424/428 of query aligns to 6:423/427 of P0ABH7
4jagA Structural determination of the a50t:s279g:s280k:v281k:k282e:h283n variant of citrate synthase from e. Coli complexed with oxaloacetate (see paper)
52% identity, 98% coverage: 5:424/428 of query aligns to 5:422/426 of 4jagA
4jaeA Structural determination of the a50t:s279g:s280k:v281k:k282e:h283n variant of citrate synthase from e. Coli complexed with s- carboxymethyl-coa (see paper)
52% identity, 98% coverage: 5:424/428 of query aligns to 5:422/426 of 4jaeA
1nxgA The f383a variant of type ii citrate synthase complexed with nadh (see paper)
52% identity, 98% coverage: 5:424/428 of query aligns to 5:422/426 of 1nxgA
2h12B Structure of acetobacter aceti citrate synthase complexed with oxaloacetate and carboxymethyldethia coenzyme a (cmx) (see paper)
52% identity, 99% coverage: 5:428/428 of query aligns to 3:426/426 of 2h12B
4tvmA Structure of citrate synthase from mycobacterium tuberculosis (see paper)
53% identity, 98% coverage: 5:425/428 of query aligns to 2:380/380 of 4tvmA
3msuB Crystal structure of citrate synthase from francisella tularensis
48% identity, 99% coverage: 1:422/428 of query aligns to 8:426/426 of 3msuB
3msuA Crystal structure of citrate synthase from francisella tularensis
47% identity, 99% coverage: 1:422/428 of query aligns to 8:415/415 of 3msuA
6abxA Crystal structure of citrate synthase (msed_1522) from metallosphaera sedula in complex with citrate (see paper)
35% identity, 91% coverage: 40:428/428 of query aligns to 1:370/370 of 6abxA
6abyA Crystal structure of citrate synthase (msed_1522) from metallosphaera sedula in complex with oxaloacetate (see paper)
35% identity, 91% coverage: 40:428/428 of query aligns to 1:370/372 of 6abyA
6abwA Crystal structure of citrate synthase (msed_0281) from metallosphaera sedula in complex with acetyl-coa (see paper)
37% identity, 88% coverage: 54:428/428 of query aligns to 8:369/369 of 6abwA
1aj8A Citrate synthase from pyrococcus furiosus (see paper)
36% identity, 90% coverage: 42:428/428 of query aligns to 1:370/371 of 1aj8A
1iomA Crystal structure of citrate synthase from thermus thermophilus hb8 (see paper)
34% identity, 90% coverage: 45:428/428 of query aligns to 4:374/374 of 1iomA
1ixeA Crystal structure of citrate synthase from thermus thermophilus hb8 (see paper)
33% identity, 90% coverage: 45:428/428 of query aligns to 4:371/371 of 1ixeA
4yboB Structure of citrate synthase from the thermoacidophilic euryarchaeon thermolasma acidophilum (see paper)
33% identity, 90% coverage: 42:428/428 of query aligns to 3:380/381 of 4yboB
2r9eA The structure of the binary complex of citryl dethia coa and citrate synthase from the thermophilic archaeonthermoplasma acidophilum
33% identity, 90% coverage: 42:428/428 of query aligns to 4:381/381 of 2r9eA
2r26A The structure of the ternary complex of carboxymethyl coenzyme a and oxalateacetate with citrate synthase from the thermophilic archaeonthermoplasma acidophilum
33% identity, 90% coverage: 42:428/428 of query aligns to 4:381/381 of 2r26A
2ifcC The structure of the binary complex of oxalateacetate with citrate synthase from the thermophilic archaeon thermolasma acidophilum
33% identity, 90% coverage: 42:428/428 of query aligns to 4:381/382 of 2ifcC
>Echvi_3057 FitnessBrowser__Cola:Echvi_3057
MSEIAKLSFNGTEYELPVTEGTENEKAIEIAKLRGQSGLITLDPGFKNTGSTKSAITFLD
GEKGILRYRGYNIEDLAEKSNFLEVSYLLIYGELPTQEQYDQFANEITYHTLVHEDIKKI
LDGFPSVAHPMGVLSSLICSLTAFYPTSLDPNRTDEEIKLSIVRLMAKLPTFAAWAYKNK
MGHPANYPDNSLDYCSNFMKMMFALPAEKYEVDPIIAKALDKLLILHADHEQNCSTSTVR
IVGSSQASIYASISAGINALWGPLHGGANQSVIEMLEAIKEDGGDTKKYLDKAKDKNDPF
RLMGFGHRVYKNFDPRAKIIKKAADDVLGKLGVNDPVLEIAKELEEAALNDQYFVDRKLY
PNVDFYSGIIYRALGIPTDMFTVMFALGRLPGWIAQWKEMRENNEPIGRPRQVYTGPNER
SYVSMGDR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory