Comparing Echvi_3072 FitnessBrowser__Cola:Echvi_3072 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
4i6vB The crystal structure of an amidohydrolase 2 from planctomyces limnophilus dsm 3776
23% identity, 44% coverage: 38:247/481 of query aligns to 18:211/430 of 4i6vB
Sites not aligning to the query:
>Echvi_3072 FitnessBrowser__Cola:Echvi_3072
MLDEVSNRLRKTKKTFLSEDFLLQSEFAQVLYHDYAKELPIIDYHCHLSPKDITENRTFK
NLTEIWLAGDHYKWRAMRTLGIDEKYITGKGSTDQEKFQKWAETVPYTLRNPLYHWTHLE
LKRYFGIEELLSPDTADDIYQKATDMLQQPSHHTRGLLSQMNVETVCSTDDPIDSLEYHI
KAKKEGIQPNLFPAFRPDKAYAVENPADYMAYLEKLQEASGVTISKYGDLLAALENQIAF
FHEHGGRLSDHGLEQLYFFKLGQYSAEDLFQKLSEQKALSNEEIQYFKFETLLHLSHMYH
AKGWTQQYHLGALRNTNERMLRVLGPDTGFDSIGDYSQAEALAKFLNQLDSTDQLTKTIL
YNLNPRDNEVLATMIGNFNDGSIRGKVQFGSGWWFLDQKDGMEKQLNALSNMGLLSCFVG
MLTDSRSFLSFPRHEYFRRTLCNLIGRDVENGELPADEKWLGKIVSDICYYNAKNYFEFE
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Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory