Comparing Echvi_4081 FitnessBrowser__Cola:Echvi_4081 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6zngF Maeb full-length acetyl-coa bound state (see paper)
52% identity, 98% coverage: 8:752/757 of query aligns to 6:744/753 of 6zngF
P76558 NADP-dependent malic enzyme; NADP-ME; EC 1.1.1.40 from Escherichia coli (strain K12) (see paper)
50% identity, 99% coverage: 7:754/757 of query aligns to 6:757/759 of P76558
6zn4A Maeb malic enzyme domain apoprotein (see paper)
62% identity, 53% coverage: 8:409/757 of query aligns to 5:406/406 of 6zn4A
6zn7A Maeb malic enzyme domain apoprotein (see paper)
63% identity, 53% coverage: 8:406/757 of query aligns to 5:403/405 of 6zn7A
5ceeA Malic enzyme from candidatus phytoplasma aywb in complex with NAD and mg2+ (see paper)
48% identity, 49% coverage: 35:407/757 of query aligns to 29:387/387 of 5ceeA
2dvmA NAD complex structure of ph1275 protein from pyrococcus horikoshii
47% identity, 57% coverage: 7:438/757 of query aligns to 2:438/438 of 2dvmA
2a9fA Crystal structure of a putative malic enzyme ((s)-malate:nad+ oxidoreductase (decarboxylating))
49% identity, 46% coverage: 20:366/757 of query aligns to 18:377/383 of 2a9fA
2haeD Crystal structure of a putative malic enzyme (malate oxidoreductase)
49% identity, 47% coverage: 9:367/757 of query aligns to 1:357/373 of 2haeD
2haeB Crystal structure of a putative malic enzyme (malate oxidoreductase)
49% identity, 47% coverage: 9:367/757 of query aligns to 1:357/373 of 2haeB
6ioxA Crystal structure of porphyromonas gingivalis phosphotransacetylase in complex with acetyl-coa (see paper)
39% identity, 42% coverage: 430:746/757 of query aligns to 7:329/339 of 6ioxA
1xcoD Crystal structure of a phosphotransacetylase from bacillus subtilis in complex with acetylphosphate (see paper)
35% identity, 43% coverage: 430:751/757 of query aligns to 6:324/325 of 1xcoD
2af3C Phosphotransacetylase from methanosarcina thermophila soaked with coenzyme a (see paper)
35% identity, 43% coverage: 430:755/757 of query aligns to 3:331/332 of 2af3C
P38503 Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Methanosarcina thermophila (see 2 papers)
35% identity, 43% coverage: 430:755/757 of query aligns to 4:332/333 of P38503
Sites not aligning to the query:
Q8ZND6 Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.222; EC 2.3.1.8 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
34% identity, 42% coverage: 438:754/757 of query aligns to 399:712/714 of Q8ZND6
Sites not aligning to the query:
P16243 NADP-dependent malic enzyme, chloroplastic; NADP-ME; EC 1.1.1.40 from Zea mays (Maize) (see 3 papers)
27% identity, 49% coverage: 36:406/757 of query aligns to 180:610/636 of P16243
Sites not aligning to the query:
6w29A Trypanosoma cruzi malic enzyme in complex with inhibitor (mec013) (see paper)
25% identity, 43% coverage: 36:357/757 of query aligns to 84:483/545 of 6w29A
6w49A Trypanosoma cruzi malic enzyme in complex with inhibitor (mec010) (see paper)
25% identity, 43% coverage: 36:357/757 of query aligns to 82:481/543 of 6w49A
6w59A Trypanosoma cruzi malic enzyme in complex with inhibitor (mec063) (see paper)
25% identity, 43% coverage: 36:357/757 of query aligns to 82:481/544 of 6w59A
6w56A Trypanosoma cruzi malic enzyme in complex with inhibitor (mec062) (see paper)
25% identity, 43% coverage: 36:357/757 of query aligns to 82:481/544 of 6w56A
6c7nB Monoclinic form of malic enzyme from sorghum at 2 angstroms resolution (see paper)
28% identity, 41% coverage: 36:343/757 of query aligns to 97:477/553 of 6c7nB
Sites not aligning to the query:
>Echvi_4081 FitnessBrowser__Cola:Echvi_4081
MAIKIRKEDALGYHSQGSPGKIEVVPTKPLSSQLDLALAYSPGVAEPCLEIAKQKENVYK
YTAKGNLVAVISNGTAVLGLGDIGPEAGKPVMEGKGVLFKKFAGIDVFDIEIDEKDPQKL
IQIIKSLEPTFGGINLEDIKAPECFEIEQALKQQMKIPVMHDDQHGTAIISGAALLNALE
IVGKKIEEIRLVVCGAGAAAVSCTRFYMSLGVKRENLVMVDIEGVIRSDRPDLDDIRKEF
STSRESLHTLSDAMKGADVFLGLSAGNIVSPEQIKSMAENPIVFALANPHPEIDYDLATA
TREDLIMATGRSDFPNQVNNVLGFPYIFRGALDVRATAINEEMKLATAHAIAKLAKEPVP
EIVNKAYGDDQLGFGRNYLIPKPLDPRLITTIAPAVAKTAMDTGVAQTAITDWETYELEL
QERIGIDQRLMSRVIARAKKHPKRVVFAEADNTKILKAAQLINDERICDPILLGNRETIL
KLIEEHSLDLSNVPIIDPYEEPERLEKFGNLLYNKRQRKGLTPFEAQKLMRDRTYFGAMM
VETGEADALISGLTKDYPKTILPALHVIGVKKDVDRVAGMYIMNSDKGPYFFADTTVNVD
PTADQIVEIIGLTADAVKFFDLEPKVAVLSYSNFGSAKGNTPTKTALATAKAKEKFPDLI
IEGEMQANVAINEAIQKENYPFSALANKKANTLIFPNLSSGNIAYKLLAEIGNAEAIGPV
LLGMNKPVHILQLGSSIREIINMVAIAVVDAQSHDNI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory