SitesBLAST
Comparing Echvi_4081 FitnessBrowser__Cola:Echvi_4081 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
6zngF Maeb full-length acetyl-coa bound state (see paper)
52% identity, 98% coverage: 8:752/757 of query aligns to 6:744/753 of 6zngF
- active site: Y38 (= Y40), A74 (= A76), K93 (= K95), E135 (= E137), D136 (= D138), D160 (= D162), D161 (= D163), N286 (= N288)
- binding acetyl coenzyme *a: R511 (= R516), K514 (= K519), Y552 (= Y557), A553 (≠ P558), R557 (≠ L562), L560 (= L565), Q561 (≠ H566), P571 (≠ R576), T590 (= T596), V591 (= V597), N592 (= N598), L593 (≠ V599), Y625 (= Y631), Q659 (= Q666), L690 (= L698), N694 (= N702), Y697 (= Y705), K698 (= K706), P711 (= P719), Q724 (= Q732)
P76558 NADP-dependent malic enzyme; NADP-ME; EC 1.1.1.40 from Escherichia coli (strain K12) (see paper)
50% identity, 99% coverage: 7:754/757 of query aligns to 6:757/759 of P76558
- K56 (≠ N57) modified: N6-acetyllysine
6zn4A Maeb malic enzyme domain apoprotein (see paper)
62% identity, 53% coverage: 8:409/757 of query aligns to 5:406/406 of 6zn4A
6zn7A Maeb malic enzyme domain apoprotein (see paper)
63% identity, 53% coverage: 8:406/757 of query aligns to 5:403/405 of 6zn7A
- active site: Y37 (= Y40), A73 (= A76), K92 (= K95), E134 (= E137), D135 (= D138), D159 (= D162), D160 (= D163), N285 (= N288)
- binding magnesium ion: E134 (= E137), D135 (= D138), D160 (= D163)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: T164 (= T167), N191 (≠ C194), G192 (= G195), A193 (= A196), G194 (= G197), A195 (= A198), S196 (≠ A199), D218 (= D221), S219 (≠ I222), K235 (= K238), L260 (= L263), S261 (= S264), V262 (≠ A265), M283 (≠ L286), A284 (= A287), N285 (= N288), G307 (= G310), V315 (= V318)
5ceeA Malic enzyme from candidatus phytoplasma aywb in complex with NAD and mg2+ (see paper)
48% identity, 49% coverage: 35:407/757 of query aligns to 29:387/387 of 5ceeA
- active site: Y34 (= Y40), A70 (= A76), K89 (= K95), E131 (= E137), D132 (= D138), D156 (= D162), D157 (= D163), N283 (= N288)
- binding magnesium ion: E131 (= E137), D132 (= D138), D157 (= D163)
- binding nicotinamide-adenine-dinucleotide: T161 (= T167), N188 (≠ C194), G189 (= G195), A190 (= A196), G191 (= G197), S192 (≠ A198), A193 (= A199), D213 (= D221), K214 (≠ I222), V258 (≠ L263), S259 (= S264), A260 (= A265), I263 (= I268), L281 (= L286), A282 (= A287), N283 (= N288), V312 (= V318), N314 (= N320)
2dvmA NAD complex structure of ph1275 protein from pyrococcus horikoshii
47% identity, 57% coverage: 7:438/757 of query aligns to 2:438/438 of 2dvmA
- active site: Y37 (= Y40), R73 (≠ A76), K92 (= K95), E134 (= E137), D135 (= D138), D159 (= D162), D160 (= D163), N296 (= N288)
- binding nicotinamide-adenine-dinucleotide: R73 (≠ A76), S138 (≠ A141), T164 (= T167), G192 (= G195), G194 (= G197), A195 (= A198), A196 (= A199), V217 (= V220), E218 (≠ D221), L219 (vs. gap), P224 (≠ I226), F269 (≠ L263), T270 (≠ S264), R271 (vs. gap), L294 (= L286), N296 (= N288), I325 (≠ V318), N327 (= N320)
2a9fA Crystal structure of a putative malic enzyme ((s)-malate:nad+ oxidoreductase (decarboxylating))
49% identity, 46% coverage: 20:366/757 of query aligns to 18:377/383 of 2a9fA
2haeD Crystal structure of a putative malic enzyme (malate oxidoreductase)
49% identity, 47% coverage: 9:367/757 of query aligns to 1:357/373 of 2haeD
2haeB Crystal structure of a putative malic enzyme (malate oxidoreductase)
49% identity, 47% coverage: 9:367/757 of query aligns to 1:357/373 of 2haeB
- active site: Y31 (= Y40), A67 (= A76), K86 (= K95), E128 (= E137), D129 (= D138), D153 (= D162), D154 (= D163), N280 (= N288)
- binding nicotinamide-adenine-dinucleotide: T158 (= T167), N185 (≠ C194), G186 (= G195), I187 (≠ A196), G188 (= G197), A189 (= A198), A190 (= A199), D210 (= D221), R211 (≠ I222), V255 (≠ L263), S256 (= S264), R257 (≠ A265), I260 (= I268), L278 (= L286), A279 (= A287), N280 (= N288), N311 (= N320)
6ioxA Crystal structure of porphyromonas gingivalis phosphotransacetylase in complex with acetyl-coa (see paper)
39% identity, 42% coverage: 430:746/757 of query aligns to 7:329/339 of 6ioxA