Comparing Echvi_4408 FitnessBrowser__Cola:Echvi_4408 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
2x60A Crystal structure of t. Maritima gdp-mannose pyrophosphorylase in complex with gtp. (see paper)
37% identity, 96% coverage: 6:323/332 of query aligns to 5:332/333 of 2x60A
2x5zA Crystal structure of t. Maritima gdp-mannose pyrophosphorylase in complex with gdp-mannose. (see paper)
37% identity, 96% coverage: 6:323/332 of query aligns to 5:332/333 of 2x5zA
2x65B Crystal structure of t. Maritima gdp-mannose pyrophosphorylase in complex with mannose-1-phosphate. (see paper)
37% identity, 96% coverage: 6:323/332 of query aligns to 5:332/334 of 2x65B
2x65A Crystal structure of t. Maritima gdp-mannose pyrophosphorylase in complex with mannose-1-phosphate. (see paper)
37% identity, 96% coverage: 6:323/332 of query aligns to 5:332/334 of 2x65A
1lvwA Crystal structure of glucose-1-phosphate thymidylyltransferase, rmla, complex with dtdp
23% identity, 79% coverage: 3:265/332 of query aligns to 4:235/295 of 1lvwA
Sites not aligning to the query:
>Echvi_4408 FitnessBrowser__Cola:Echvi_4408
MKITNVVLSGGVGSRLWPLSRKSCPKQYLPIFEERTLFQKTVERNQPLCDQLMIVGNQAN
YELSRKDIKGLGITKYIEVIEACPRNTAAAIAFAAFRSGPEDILFVTPSDHLITTGDAYT
KSVERAIELAKEDHIVTFGLKPTRPETGFGYIEADGESVKGFREKPDLATAEQFLEQGNF
LWNSGMFCFKAQVFLSELESYEPEVFKRSQEAMEAASDGFLDKELSMKIPSISVDYAVME
RTRKIKVVPSSFGWSDMGSFESVFEYMEQHGYEPDAQGNMIIGSNVHTEFVGLENTILVQ
TKDAILVLKKESAQDVKKVFEKLEKDKPELVD
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory