Comparing GFF1025 FitnessBrowser__Marino:GFF1025 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3u9sF Crystal structure of p. Aeruginosa 3-methylcrotonyl-coa carboxylase (mcc) 750 kd holoenzyme, coa complex (see paper)
75% identity, 100% coverage: 1:535/535 of query aligns to 3:537/537 of 3u9sF
8k2vG 3-methylcrotonyl-coa carboxylase in mccd state with acetyl coa
69% identity, 98% coverage: 12:535/535 of query aligns to 17:541/541 of 8k2vG
8j4zJ Human 3-methylcrotonyl-coa carboxylase in bccp-cts state with substrate
69% identity, 98% coverage: 12:535/535 of query aligns to 17:541/541 of 8j4zJ
8jxmC Human 3-methylcrotonyl-coa carboxylase in bccp-h2 state with mcoa
66% identity, 98% coverage: 12:535/535 of query aligns to 17:520/520 of 8jxmC
8f3dA 3-methylcrotonyl-coa carboxylase in filament, beta-subunit centered (see paper)
58% identity, 98% coverage: 2:524/535 of query aligns to 17:566/566 of 8f3dA
8rthF Trypanosoma brucei 3-methylcrotonyl-coa carboxylase (see paper)
60% identity, 98% coverage: 3:524/535 of query aligns to 21:542/542 of 8rthF
1vrgA Crystal structure of propionyl-coa carboxylase, beta subunit (tm0716) from thermotoga maritima at 2.30 a resolution
35% identity, 93% coverage: 21:517/535 of query aligns to 2:495/515 of 1vrgA
1on3E Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
37% identity, 95% coverage: 21:526/535 of query aligns to 8:513/520 of 1on3E
1on3C Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
37% identity, 95% coverage: 21:526/535 of query aligns to 4:503/510 of 1on3C