SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing GFF1057 FitnessBrowser__psRCH2:GFF1057 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
43% identity, 96% coverage: 10:238/238 of query aligns to 7:239/240 of 1ji0A

query
sites
1ji0A

L

L

R

E

V

V

S

Q

D

S

L

L

H

H

A

V

F

Y

Y
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Y

G

G

E

A

S

I

H

H

I

A

L

I

H

K

G

G

V

I

D

D

L

L

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V

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P

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G

G

E

Q

L

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T

T

L

L

L

I

G

G

R

A

N

N

G
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G

A

A

G
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G

R
x
K

S
x
T

T
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T

T

T

L

L

R

S

A

A

I

I

M

A

N

G

M

L

V

V

G

R

R

A

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K

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K

I

I

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F

N

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N

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D

T

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P

A

A

H

H

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N

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L

M

G

G

V

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G

A

Y

L

C

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E
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E

E

G

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R

G

R

I

I

F

F

A

P

S

E

L

L

S

T

V

V

E

Y

E

E

N

N

L

L

L

M

L

M

P

G

P

A

T

Y

V

N

R

R

S

K

G

D

-

K

-

E

-

G

-

I

G

K

M

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D

L

L

D

E

E

W

L

I

Y

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E

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L

F

F

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P

N

R

L

L

Y

K

E

E

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R

L

F

K

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Q

Q

L

G

G

T

G

R

T

L

L

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S

G

G

G

G

E

E

Q

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Q

Q

M

M

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L

A

A

M

I

A

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A

L

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L

L

L

L

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M

L

M

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E
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E

I

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L

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G

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L

A

A

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P

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L

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F

E

E

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L

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K

L

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N

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E

G

G

L

T

T

T

I

I

V

L

L

L

V

V

E

E

Q

Q

N

N

F

A

R

L

F

G

A

A

A

L

P

K

L

V

A

A

D

H

R

Y

H

G

Y

Y

V

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M

L

E

E

H

T

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G

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I

I

I

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E

L

E

E

I

G

E

K

A

A

A

S

D

E

L

L

D

L

S

D

K

N

K

E

D

M

F

V

L

R

N

K

S

A

C

Y

L

L

G

G

V

V

binding adenosine-5'-triphosphate: Y16 (= Y19), G42 (= G45), G44 (= G47), K45 (≠ R48), T46 (≠ S49), T47 (= T50), E88 (= E91), E165 (= E164)

6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
32% identity, 88% coverage: 10:219/238 of query aligns to 3:217/240 of 6mjpA

query
sites
6mjpA

L

L

R

K

V

A

S

Q

D

H

L

L

H

A

A

K

F

S

Y

Y

G

K

E

K

S

R

H

K

I

V

L

V

H

S

G

D

V

V

D

S

L

L

V

Q

V

V

G

E

R

S

G

G

E

Q

L

I

V

V

T

G

L

L

L

L

G

G

R

P

N

N

G

G

A

A

G

G

R

K

S

T

T

T

T

S

L

F

R

Y

A

M

I

I

M

V

N

G

M

L

V

V

G

A

R

R

R

D

T

E

G

G

S

T

I

I

V

T

V

I

N

D

G

D

N

N

E

D

T

I

I

S

G

I

M

L

P

P

A

M

H

H

Q

S

I

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S

R

R

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M

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G

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I

G

G

Y

Y

C

L

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P

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Q

E

E

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A

G

S

I

I

F

F

A

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S

K

L

L

S

S

V

V

E

E

E

D

N

N

L

I

L

M

L

A

P

V

P

L

T

Q

V

T

R

R

S

E

G

E

-

L

-

T

-

H

-
x
E

-

E

-

R

G

Q

M
x
D

S

K

L

L

D

E

E

D

L

L

Y

L

E

E

M

E

F

F

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N

H

L

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Y

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I

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A

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G

T

M

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G

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E

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A

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A

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A

G

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L

L

L

L

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N

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L

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I

E

A

E

E

binding calcium ion: E111 (vs. gap), D115 (≠ M116)

6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
32% identity, 87% coverage: 10:217/238 of query aligns to 3:215/238 of 6s8nB

query
sites
6s8nB

L

L

R

T

V

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N

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A

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F

A

Y

Y

G

K

E

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R

I

V

L

V

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E

G

D

V

V

D

S

L

L

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V

G

N

R

S

G

G

E

E

L

I

V

V

T

G

L

L

L

L

G

G

R

P

N

N

G

G

A

A

G

G

R

K

S

T

T

T

T

T

L

F

R

Y

A

M

I

V

M

V

N

G

M

I

V

V

G

P

R

R

R

D

T

A

G

G

S

N

I

I

V

I

V

I

N

D

G

D

N

D

E

D

T

I

I

S

G

L

M

L

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P

A

L

H

H

Q

A

I

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A

R

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L

R

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G

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I

G

G

Y

Y

C

L

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P

E

Q

E

E

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S

I

I

F

F

A
x
R

S

R

L

L

S

S

V

V

E

Y

E

D

N

N

L

L

L

M

L

A

P

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P

L

T

Q

V

I

R

R

S

D

G

D

G

L

M

S

S

A

-

E

-

Q

-

R

-

E

-

D

-

R

L

A

D

N

E

E

L

L

Y

M

E

E

M

E

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N

H

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Y

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E

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x
M

G
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G

T
x
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R

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G

G

G

G

E

E

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V

A

E

M

I

A

A

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A

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L

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A

G

N

A

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N

K

L

F

L

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L

L

L

L

D

D

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H

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N

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A

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A

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I

binding 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione: R90 (≠ A97), M133 (≠ Q135), G134 (= G136), Q135 (≠ T137)

6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
32% identity, 87% coverage: 10:217/238 of query aligns to 3:215/238 of 6s8gA

query
sites
6s8gA

L

L

R

T

V

A

S

K

D

N

L

L

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A

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Y
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Y

G

K

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x
R

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L

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D

V

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D

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L

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N

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S

G

G

E

E

L

I

V

V

T

G

L

L

L

L

G

G

R

P

N
|
N

G

G

A

A

G
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G

R
x
K

S
x
T

T
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T

T

T

L

F

R

Y

A

M

I

V

M

V

N

G

M

I

V

V

G

P

R

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R

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T

A

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G

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N

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D

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D

N

D

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x
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F

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L

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N

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D

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A

-

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N

E

E

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N

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S

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M

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G

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x
S

L

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S

G

G

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E
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E

Q

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V

A

E

M

I

A

A

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R

I

A

L

L

R

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G

N

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L

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L

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L

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L

L

D

D

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L

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K

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L

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K

H

L

L

K

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D

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S

G

G

L

L

T

G

I

V

V

L

L

I

V

T

E

D

Q

H

N

N

F

V

R

R

F

E

A

T

A

L

P

A

L

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A

C

D

E

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H

A

Y

Y

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G

G

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L

I

I

binding phosphoaminophosphonic acid-adenylate ester: Y12 (= Y19), R15 (≠ S22), N37 (= N44), G40 (= G47), K41 (≠ R48), T42 (≠ S49), T43 (= T50), Q84 (≠ E91), S136 (≠ R138), S138 (= S140), E141 (= E143)

6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
32% identity, 87% coverage: 10:217/238 of query aligns to 3:215/233 of 6b8bA

query
sites
6b8bA

L

L

R

T

V

A

S

K

D

N

L

L

H

A

A

K

F

A

Y
|
Y

G

K

E

G

S
x
R

H

R

I
x
V

L

V

H

E

G

D

V

V

D

S

L

L

V

T

V

V

G

N

R

S

G

G

E

E

L

I

V

V

T

G

L

L

L

L

G

G

R

P

N

N

G
|
G

A

A

G
|
G

R
x
K

S
x
T

T
|
T

T

T

L

F

R

Y

A

M

I

V

M

V

N

G

M

I

V

V

G

P

R

R

R

D

T

A

G

G

S

N

I

I

V

I

V

I

N

D

G

D

N

D

E

D

T

I

I

S

G

L

M

L

P

P

A

L

H

H

Q

A

I

R

P

A

R

R

L

R

G

G

V

I

G

G

Y

Y

C

L

P

P

E

Q

E

E

R

A

G

S

I

I

F
|
F

A
x
R

S
x
R

L

L

S

S

V

V

E

Y

E

D

N

N

L

L

L

M

L

A

P

V

P

L

T

Q

V

I

R

R

S

D

G

D

G

L

M

S

S

A

-

E

-

Q

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R

-

E

-

D

-

R

L

A

D

N

E

E

L

L

Y

M

E

E

M

E

F

F

P

-

N

H

L

I

Y

E

E

H

R

L

R

R

F

D

S

S

Q

M

G

G

T

Q

R

S

L

L

S

S

G

G

G

G

E

E

Q

R

Q

R

M

R

L

V

A

E

M

I

A

A

R

R

I

A

L

L

R

A

T

A

G

N

A

P

N

K

L

F

L

I

L

L

L

L

D

D

E

E

I

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T

F

E

A

G

G

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P

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K

D

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K

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I

L

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K

H

L

L

K

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D

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S

G

G

L

L

T

G

I

V

V

L

L

I

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T

E

D

Q

H

N

N

F

V

R

R

F

E

A

T

A

L

P

A

L

V

A

C

D

E

R

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H

A

Y

Y

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G

G

R

H

I

L

I

I

binding adenosine-5'-diphosphate: Y12 (= Y19), R15 (≠ S22), V17 (≠ I24), G38 (= G45), G40 (= G47), K41 (≠ R48), T42 (≠ S49), T43 (= T50)
binding (3s,5s,7s)-N-{7-[(3-O-carbamoyl-6-deoxy-5-methyl-4-O-methyl-beta-D-gulopyranosyl)oxy]-4-hydroxy-8-methyl-2-oxo-2H-1-benzopyran-3-yl}tricyclo[3.3.1.1~3,7~]decane-1-carboxamide: F89 (= F96), R90 (≠ A97), R91 (≠ S98)

6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
32% identity, 87% coverage: 10:217/238 of query aligns to 3:215/234 of 6b89A

query
sites
6b89A

L

L

R

T

V

A

S

K

D

N

L

L

H

A

A

K

F

A

Y
|
Y

G

K

E

G

S
x
R

H

R

I
x
V

L

V

H

E

G

D

V

V

D

S

L

L

V

T

V

V

G

N

R

S

G

G

E

E

L

I

V

V

T

G

L

L

L

L

G

G

R

P

N
|
N

G
|
G

A

A

G
|
G

R
x
K

S
x
T

T
|
T

T

T

L

F

R

Y

A

M

I

V

M

V

N

G

M

I

V

V

G

P

R

R

R

D

T

A

G

G

S

N

I

I

V

I

V

I

N

D

G

D

N

D

E

D

T

I

I

S

G

L

M

L

P

P

A
x
L

H
|
H

Q

A

I

R

P

A

R

R

L

R

G

G

V

I

G

G

Y

Y

C

L

P
|
P

E
x
Q

E

E

R
x
A

G
x
S

I

I

F
|
F

A
x
R

S
x
R

L
|
L

S

S

V

V

E

Y

E

D

N

N

L

L

L

M

L

A

P
x
V

P

L

T

Q

V

I

R

R

S

D

G

D

G

L

M

S

S

A

-

E

-

Q

-

R

-

E

-

D

-

R

L

A

D

N

E

E

L

L

Y

M

E

E

M

E

F

F

P

-

N

H

L

I

Y

E

E

H

R

L

R

R

F

D

S

S

Q

M

G

G

T
x
Q

R

S

L

L

S

S

G

G

G

G

E

E

Q

R

Q

R

M

R

L

V

A

E

M

I

A

A

R
|
R

I

A

L

L

R

A

T

A

G

N

A

P

N

K

L

F

L

I

L

L

L

L

D

D

E

E

I

P

T

F

E

A

G

G

L

V

A

D

P

P

V

I

I

S

V

V

Q

I

K

D

L

I

G

K

E

R

V

I

L

I

I

E

K

H

L

L

K

R

Q

D

R

S

G

G

L

L

T

G

I

V

V

L

L

I

V

T

E

D

Q

H

N

N

F

V

R

R

F

E

A

T

A

L

P

A

L

V

A

C

D

E

R

R

H

A

Y

Y

V

I

M

V

E

S

H

Q

G

G

R

H

I

L

I

I

binding adenosine-5'-diphosphate: Y12 (= Y19), R15 (≠ S22), V17 (≠ I24), N37 (= N44), G38 (= G45), G40 (= G47), K41 (≠ R48), T42 (≠ S49), T43 (= T50)
binding magnesium ion: T42 (≠ S49), Q84 (≠ E91)
binding novobiocin: L71 (≠ A78), H72 (= H79), P83 (= P90), A86 (≠ R93), S87 (≠ G94), F89 (= F96), R90 (≠ A97), R91 (≠ S98), L92 (= L99), V101 (≠ P108), Q135 (≠ T137), R149 (= R151)

4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
32% identity, 87% coverage: 10:217/238 of query aligns to 3:215/234 of 4p31A

query
sites
4p31A

L

L

R

T

V

A

S

K

D

N

L

L

H

A

A

K

F

A

Y
|
Y

G

K

E

G

S
x
R

H

R

I
x
V

L

V

H

E

G

D

V

V

D

S

L

L

V

T

V

V

G

N

R

S

G

G

E

E

L

I

V

V

T

G

L

L

L

L

G

G

R

P

N

N

G
|
G

A

A

G
|
G

R
x
K

S
x
T

T
|
T

T

T

L

F

R

Y

A

M

I

V

M

V

N

G

M

I

V

V

G

P

R

R

R

D

T

A

G

G

S

N

I

I

V

I

V

I

N

D

G

D

N

D

E

D

T

I

I

S

G

L

M

L

P

P

A

L

H

H

Q

A

I

R

P

A

R

R

L

R

G

G

V

I

G

G

Y

Y

C

L

P

P

E
x
Q

E

E

R

A

G

S

I

I

F

F

A

R

S

R

L

L

S

S

V

V

E

Y

E

D

N

N

L

L

L

M

L

A

P

V

P

L

T

Q

V

I

R

R

S

D

G

D

G

L

M

S

S

A

-

E

-

Q

-

R

-

E

-

D

-

R

L

A

D

N

E

E

L

L

Y

M

E

E

M

E

F

F

P

-

N

H

L

I

Y

E

E

H

R

L

R

R

F

D

S

S

Q

M

G

G

T

Q

R

S

L

L

S

S

G

G

G

G

E

E

Q

R

Q

R

M

R

L

V

A

E

M

I

A

A

R

R

I

A

L

L

R

A

T

A

G

N

A

P

N

K

L

F

L

I

L

L

L

L

D

D

E

E

I

P

T

F

E

A

G

G

L

V

A

D

P

P

V

I

I

S

V

V

Q

I

K

D

L

I

G

K

E

R

V

I

L

I

I

E

K

H

L

L

K

R

Q

D

R

S

G

G

L

L

T

G

I

V

V

L

L

I

V

T

E

D

Q

H

N

N

F

V

R

R

F

E

A

T

A

L

P

A

L

V

A

C

D

E

R

R

H

A

Y

Y

V

I

M

V

E

S

H

Q

G

G

R

H

I

L

I

I

binding adenosine-5'-diphosphate: Y12 (= Y19), R15 (≠ S22), V17 (≠ I24), G38 (= G45), G40 (= G47), K41 (≠ R48), T42 (≠ S49), T43 (= T50)
binding magnesium ion: T42 (≠ S49), Q84 (≠ E91)

6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
32% identity, 87% coverage: 10:217/238 of query aligns to 3:215/235 of 6mhzA

query
sites
6mhzA

L

L

R

T

V

A

S

K

D

N

L

L

H

A

A

K

F

A

Y
|
Y

G

K

E

G

S

R

H

R

I

V

L

V

H

E

G

D

V

V

D

S

L

L

V

T

V

V

G

N

R

S

G

G

E

E

L

I

V

V

T

G

L

L

L

L

G

G

R

P

N
|
N

G
|
G

A

A

G
|
G

R
x
K

S
x
T

T
|
T

T

T

L

F

R

Y

A

M

I

V

M

V

N

G

M

I

V

V

G

P

R

R

R

D

T

A

G

G

S

N

I

I

V

I

V

I

N

D

G

D

N

D

E

D

T

I

I

S

G

L

M

L

P

P

A

L

H

H

Q

A

I

R

P

A

R

R

L

R

G

G

V

I

G

G

Y

Y

C

L

P

P

E
x
Q

E

E

R

A

G

S

I

I

F

F

A

R

S

R

L

L

S

S

V

V

E

Y

E

D

N

N

L

L

L

M

L

A

P

V

P

L

T

Q

V

I

R

R

S

D

G

D

G

L

M

S

S

A

-

E

-

Q

-

R

-

E

-

D

-

R

L

A

D

N

E

E

L

L

Y

M

E

E

M

E

F

F

P

-

N

H

L

I

Y

E

E

H

R

L

R

R

F

D

S

S

Q

M

G

G

T

Q

R
x
S

L

L

S
|
S

G
|
G

G
|
G

E

E

Q

R

Q

R

M

R

L

V

A

E

M

I

A

A

R

R

I

A

L

L

R

A

T

A

G

N

A

P

N

K

L

F

L

I

L

L

L

L

D

D

E
|
E

I

P

T

F

E

A

G
|
G

L

V

A

D

P

P

V

I

I

S

V

V

Q

I

K

D

L

I

G

K

E

R

V

I

L

I

I

E

K

H

L

L

K

R

Q

D

R

S

G

G

L

L

T

G

I

V

V

L

L

I

V

T

E

D

Q
x
H

N

N

F

V

R

R

F

E

A

T

A

L

P

A

L

V

A

C

D

E

R

R

H

A

Y

Y

V

I

M

V

E

S

H

Q

G

G

R

H

I

L

I

I

binding adp orthovanadate: Y12 (= Y19), N37 (= N44), G38 (= G45), G40 (= G47), K41 (≠ R48), T42 (≠ S49), T43 (= T50), Q84 (≠ E91), S136 (≠ R138), S138 (= S140), G139 (= G141), G140 (= G142), E162 (= E164), G166 (= G168), H194 (≠ Q196)

6mbnA Lptb e163q in complex with atp (see paper)
32% identity, 87% coverage: 10:217/238 of query aligns to 4:216/241 of 6mbnA

query
sites
6mbnA

L

L

R

T

V

A

S

K

D

N

L

L

H

A

A

K

F

A

Y
|
Y

G

K

E

G

S
x
R

H

R

I
x
V

L

V

H

E

G

D

V

V

D

S

L

L

V

T

V

V

G

N

R

S

G

G

E

E

L

I

V

V

T

G

L

L

L

L

G

G

R

P

N
|
N

G
|
G

A

A

G
|
G

R
x
K

S
x
T

T
|
T

T

T

L

F

R

Y

A

M

I

V

M

V

N

G

M

I

V

V

G

P

R

R

R

D

T

A

G

G

S

N

I

I

V

I

V

I

N

D

G

D

N

D

E

D

T

I

I

S

G

L

M

L

P

P

A

L

H

H

Q

A

I

R

P

A

R

R

L

R

G

G

V

I

G

G

Y

Y

C

L

P

P

E

Q

E

E

R

A

G

S

I

I

F

F

A

R

S

R

L

L

S

S

V

V

E

Y

E

D

N

N

L

L

L

M

L

A

P

V

P

L

T

Q

V

I

R

R

S

D

G

D

G

L

M

S

S

A

-

E

-

Q

-

R

-

E

-

D

-

R

L

A

D

N

E

E

L

L

Y

M

E

E

M

E

F

F

P

-

N

H

L

I

Y

E

E

H

R

L

R

R

F

D

S

S

Q

M

G

G

T

Q

R

S

L

L

S

S

G

G

G

G

E

E

Q

R

Q

R

M

R

L

V

A

E

M

I

A

A

R

R

I

A

L

L

R

A

T

A

G

N

A

P

N

K

L

F

L

I

L

L

L

L

D

D

E

Q

I

P

T

F

E

A

G

G

L

V

A

D

P

P

V

I

I

S

V

V

Q

I

K

D

L

I

G

K

E

R

V

I

L

I

I

E

K

H

L

L

K

R

Q

D

R

S

G

G

L

L

T

G

I

V

V

L

L

I

V

T

E

D

Q
x
H

N

N

F

V

R

R

F

E

A

T

A

L

P

A

L

V

A

C

D

E

R

R

H

A

Y

Y

V

I

M

V

E

S

H

Q

G

G

R

H

I

L

I

I

binding adenosine-5'-triphosphate: Y13 (= Y19), R16 (≠ S22), V18 (≠ I24), N38 (= N44), G39 (= G45), G41 (= G47), K42 (≠ R48), T43 (≠ S49), T44 (= T50), H195 (≠ Q196)

4u00A Crystal structure of ttha1159 in complex with adp (see paper)
34% identity, 88% coverage: 10:219/238 of query aligns to 3:217/241 of 4u00A

query
sites
4u00A

L

I

R

R

V

I

S

R

D

N

L

L

H

H

A

K

F

W

Y
x
F

G

G

E

P

S

L

H

H

I
x
V

L

L

H

K

G

G

V

I

D

H

L

L

V

E

V

V

G

A

R

P

G

G

E

E

L

K

V

L

T

V

L

I

L

I

G

G

R

P

N
x
S

G
|
G

A
x
S

G
|
G

R
x
K

S
|
S

T
|
T

T

L

L

I

R

R

A

T

I

I

M

N

N

R

M

L

V

E

G

D

R

F

R

Q

T

E

G

G

S

E

I

V

V

V

V

V

N

D

G

G

N

L

E

S

T

V

I

K

G

D

M

D

P

R

A

A

H

L

Q

R

I

E

P

I

R

R

L

R

G

E

V

V

G

G

Y

M

C

V

P

F

E

Q

E

Q

R

F

G

N

I

L

F

F

A

P

S

H

L

M

S

T

V

V

E

L

E

E

N

N

L

V

L

T

L

L

P

A

P

P

T

M

-

R

V

V

R

R

-

R

-

W

-

P

-

R

-

E

S

K

G

A

G

E

M

K

S

K

L

A

D

L

E

E

L

L

Y

L

E

E

M

R

F

V

P

G

N

I

L

L

Y

D

E

Q

R

A

R

R

F

-

S

K

Q

Y

G

P

T

A

R

Q

L

L

S

S

G

G

G

G

E

Q

Q

Q

Q

Q

M

R

L

V

A

A

M

I

A

A

R

R

I

A

L

L

R

A

T

M

G

E

A

P

N

K

L

I

L

M

L

L

L

F

D

D

E

E

I

P

T

T

E

S

G

A

L

L

A

D

P

P

V

E

I

M

V

V

Q

G

K

E

L

V

G

L

E

D

V

V

L

M

I

R

K

D

L

L

K

A

Q

Q

R

G

G

G

L

M

T

T

I

M

V

V

L

V

V

V

E

T

Q

H

N

E

F

M

R

G

F

F

A

A

A

R

P

E

L

V

A

A

D

D

R

R

H

V

Y

V

V

F

M

M

E

D

H

G

G

G

R

Q

I

I

I

V

E

E

E

E

binding adenosine-5'-diphosphate: F12 (≠ Y19), V17 (≠ I24), S37 (≠ N44), G38 (= G45), S39 (≠ A46), G40 (= G47), K41 (≠ R48), S42 (= S49), T43 (= T50)

4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
32% identity, 87% coverage: 12:219/238 of query aligns to 4:217/240 of 4ymuJ

query
sites
4ymuJ

V

V

S

N

D

D

L

V

H

Y

A

K

F

N

Y
x
F

G

G

E

S

S

L

H

E

I
x
V

L

L

H

K

G

G

V

V

D

T

L

L

V

K

V

V

G

N

R

K

G

G

E

E

L

V

V

V

T

V

L

I

L

I

G

G

R

P

N
x
S

G
|
G

A
x
S

G
|
G

R
x
K

S
|
S

T
|
T

T

L

L

L

R

R

A

C

I

I

M

N

N

L

M

L

V

E

G

E

R

P

R

T

T

K

G

G

S

E

I

V

V

F

V

I

N

D

G

G

N

V

E

K

-

I

T

N

I

N

G

G

M

K

P

V

A

N

H

I

Q

N

I

K

P

V

R

R

L

Q

G

K

V

V

G

G

Y

M

C

V

P

F

E

Q

E

H

R

F

G

N

I

L

F

F

A

P

S

H

L

L

S

T

V

A

E

I

E

E

N

N

L

I

L

T

L

L

P

A

P

P

T

-

V

V

R

K

S

V

G

K

G

K

M

M

S

N

L

K

D

K

E

E

L

A

Y

E

E

E

M

L

F

A

P

V

N

D

L

L

Y

L

-

A

-

K

-

V

-

G

-

L

-

L

E

D

R

K

R

K

F

D

S

Q

Q

Y

G

P

T

I

R

K

L

L

S

S

G

G

G

G

E

Q

Q

K

Q

Q

M

R

L

L

A

A

M

I

A

A

R

R

I

A

L

L

R

A

T

M

G

Q

A

P

N

E

L

V

L

M

L

L

L

F

D

D

E
|
E

I

P

T

T

E

S

G

A

L

L

A

D

P

P

V

E

I

M

V

V

Q

K

K

E

L

V

G

L

E

N

V

V

L

M

I

K

K

Q

L

L

K

A

Q

N

R

E

G

G

L

M

T

T

I

M

V

V

L

V

V

V

E

T

Q
x
H

N

E

F

M

R

G

F

F

A

A

A

R

P

E

L

V

A

G

D

D

R

R

H

V

Y

I

V

F

M

M

E

D

H

D

G

G

R

V

I

I

I

V

E

E

E

E

binding adenosine-5'-triphosphate: F11 (≠ Y19), V16 (≠ I24), S36 (≠ N44), G37 (= G45), S38 (≠ A46), G39 (= G47), K40 (≠ R48), S41 (= S49), T42 (= T50), E162 (= E164), H194 (≠ Q196)
binding magnesium ion: S41 (= S49), E162 (= E164)

5lj7A Structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) (see paper)
28% identity, 92% coverage: 10:227/238 of query aligns to 4:231/592 of 5lj7A

query
sites
5lj7A

L

I

R

E

V

I

S

K

D

Q

L

L

H

N

A

R

F

Y

Y

F

G

G

E

E

S

G

-

E

-

N

-

R

-

V

H

H

I
x
V

L

L

H

K

G

D

V

I

D

S

L

L

V

S

V

I

G

E

R

R

G

G

E

D

L

F

V

V

T

A

L

I

L

M

G

G

R

Q

N
x
S

G
|
G

A

S

G
|
G

R
x
K

S
|
S

T
|
T

T

L

L

M

R

N

A

I

I

I

M

G

N

C

M

L

V

D

G

T

R

A

R

T

T

G

G

G

S

S

I

S

V

K

V

I

N

D

G

G

N

K

E

E

T

T

I

I

G

E

M

L

P

T

A

N

H

D

Q

Q

I

L

P

S

R

D

L

L

-

R

-

S

-

Q

G

K

V

F

G

G

Y

F

C

I

P

F

E
x
Q

E

R

R

Y

G

N

I

L

F

L

A

S

S

S

L

L

S

T

V

A

E

A

E

E

N

N

L

V

L

A

L

L

P

P

P

A

T

I

V

Y

R

-

S

-

G

A

G

G

M

M

S

P

L

Q

D

S

E

Q

L

R

Y

L

E

E

M

R

F

A

P

K

N

Q

L

L

Y

L

E

E

R

K

-

L

-

G

-

L

-

G

-

D

-
x
K

R

W

F

Q

S

N

Q

K

G

P

T

N

R
x
Q

L

L

S
|
S

G

G

G
|
G

E
x
Q

Q

Q

Q

Q

M

R

L

V

A

S

M

I

A

A

R

R

I

A

L

L

R

M

T

N

G

G

A

G

N

E

L

I

L

I

L

L

L

A

D

D

E

Q

I

P

T

T

E

G

G

A

L

L

A

D

P

S

V

H

I

S

V

G

Q

E

K

N

L

V

G

M

E

E

V

I

L

L

I

R

K

Q

L

L

K

H

Q

E

R

E

G

G

L

H

T

T

I

I

V

I

L

M

V

V

E

T

Q

H

N

D

F

K

R

H

F

I

A

A

A

A

P

S

L

-

A

A

D

N

R

R

H

I

Y

I

V

E

M

I

E

K

H

D

G

G

R

E

I

I

I

I

E

S

E

D

I

T

E

Q

A

K

A

R

D

Q

L

V

D

K

S

S

binding adenosine-5'-triphosphate: V22 (≠ I24), S42 (≠ N44), G43 (= G45), G45 (= G47), K46 (≠ R48), S47 (= S49), T48 (= T50), Q92 (≠ E91), K136 (vs. gap), Q143 (≠ R138), S145 (= S140), G147 (= G142), Q148 (≠ E143)
binding magnesium ion: S47 (= S49), Q92 (≠ E91)

5lilA Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
28% identity, 92% coverage: 10:227/238 of query aligns to 4:231/615 of 5lilA

query
sites
5lilA

L

I

R

E

V

I

S

K

D

Q

L

L

H

N

A

R

F

Y

Y
x
F

G

G

E

E

S

G

-

E

-

N

-

R

-

V

H

H

I
x
V

L

L

H

K

G

D

V

I

D

S

L

L

V

S

V

I

G

E

R

R

G

G

E

D

L

F

V

V

T

A

L

I

L

M

G

G

R

Q

N
x
S

G
|
G

A

S

G
|
G

R
x
K

S
|
S

T
|
T

T

L

L

M

R

N

A

I

I

I

M

G

N

C

M

L

V

D

G

T

R

A

R

T

T

G

G

G

S

S

I

S

V

K

V

I

N

D

G

G

N

K

E

E

T

T

I

I

G

E

M

L

P

T

A

N

H

D

Q

Q

I

L

P

S

R

D

L

L

-

R

-

S

-

Q

G

K

V

F

G

G

Y

F

C

I

P

F

E
x
Q

E

R

R

Y

G

N

I

L

F

L

A

S

S

S

L

L

S

T

V

A

E

A

E

E

N

N

L

V

L

A

L

L

P

P

P

A

T

I

V

Y

R

-

S

-

G

A

G

G

M

M

S

P

L

Q

D

S

E

Q

L

R

Y

L

E

E

M

R

F

A

P

K

N

Q

L

L

Y

L

E

E

R

K

-

L

-

G

-

L

-

G

-

D

-
x
K

R

W

F

Q

S

N

Q

K

G

P

T

N

R
x
Q

L

L

S
|
S

G

G

G
|
G

E
x
Q

Q

Q

Q

Q

M

R

L

V

A

S

M

I

A

A

R

R

I

A

L

L

R

M

T

N

G

G

A

G

N

E

L

I

L

I

L

L

L

A

D

D

E

Q

I

P

T

T

E

G

G

A

L

L

A

D

P

S

V

H

I

S

V

G

Q

E

K

N

L

V

G

M

E

E

V

I

L

L

I

R

K

Q

L

L

K

H

Q

E

R

E

G

G

L

H

T

T

I

I

V

I

L

M

V

V

E

T

Q

H

N

D

F

K

R

H

F

I

A

A

A

A

P

S

L

-

A

A

D

N

R

R

H

I

Y

I

V

E

M

I

E

K

H

D

G

G

R

E

I

I

I

I

E

S

E

D

I

T

E

Q

A

K

A

R

D

Q

L

V

D

K

S

S

binding adenosine-5'-triphosphate: F13 (≠ Y19), V22 (≠ I24), S42 (≠ N44), G43 (= G45), G45 (= G47), K46 (≠ R48), S47 (= S49), T48 (= T50), Q92 (≠ E91), K136 (vs. gap), Q143 (≠ R138), S145 (= S140), G147 (= G142), Q148 (≠ E143)
binding magnesium ion: S47 (= S49), Q92 (≠ E91)

3c4jA Abc protein artp in complex with atp-gamma-s
30% identity, 91% coverage: 10:225/238 of query aligns to 1:225/242 of 3c4jA

query
sites
3c4jA

L

L

R

Q

V

M

S

I

D

D

L

V

H

H

A

Q

F

L

-

K

-

K

-

S

Y
x
F

G

G

E

S

S

L

H

E

I
x
V

L

L

H

K

G

G

V

I

D

N

L

V

V

H

V

I

G

R

R

E

G

G

E

E

L

V

V

V

T

V

L

V

L

I

G

G

R

P

N
x
S

G
|
G

A
x
S

G
|
G

R
x
K

S
|
S

T
|
T

T

F

L

L

R

R

A

C

I

L

M

N

N

L

M

L

V

E

G

D

R

F

R

D

T

E

G

G

S

E

I

I

V

I

V

I

N

D

G

G

N

-

E

-

T

-

I

I

G

N

M

L

P

K

A

A

H

K

Q

D

I

T

P

N

-

L

-

N

-

K

-

V

R

R

L

E

G

E

V

V

G

G

Y

M

C

V

P

F

E

Q

E

R

R

F

G

N

I

L

F

F

A

P

S

H

L

M

S

T

V

V

E

L

E

N

N

N

L

I

L

T

L

L

P

A

P

P

-

M

T

K

V

V

R

R

S

K

G

W

G

P

M

R

S

E

L

K

D

A

E

E

L

A

Y

K

E

A

M

M

-

E

-

L

-

L

-

D

F

K

P

V

N

G

L

L

Y

K

E

D

R

K

R

A

F

H

S

A

Q

Y

G

P

T

D

R

S

L

L

S

S

G

G

G

G

E

Q

Q

A

Q

Q

M

R

L

V

A

A

M

I

A

A

R

R

I

A

L

L

R

A

T

M

G

E

A

P

N

K

L

I

L

M

L

L

L

F

D

D

E

E

I

P

T

T

E

S

G

A

L

L

A

D

P

P

V

E

I

M

V

V

Q

G

K

E

L

V

G

L

E

S

V

V

L

M

I

K

K

Q

L

L

K

A

Q

N

R

E

G

G

L

M

T

T

I

M

V

V

L

V

V

V

E

T

Q

H

N

E

F

M

R

G

F

F

A

A

A

R

P

E

L

V

A

G

D

D

R

R

H

V

Y

L

V

F

M

M

E

D

H

G

G

G

R

Y

I

I

I

I

E

E

E

E

I

G

E

K

A

P

A

E

D

D

L

L

binding phosphothiophosphoric acid-adenylate ester: F13 (≠ Y19), V18 (≠ I24), S38 (≠ N44), G39 (= G45), S40 (≠ A46), G41 (= G47), K42 (≠ R48), S43 (= S49), T44 (= T50)

3c41J Abc protein artp in complex with amp-pnp/mg2+
30% identity, 91% coverage: 10:225/238 of query aligns to 1:225/242 of 3c41J

query
sites
3c41J

L

L

R

Q

V

M

S

I

D

D

L

V

H

H

A

Q

F

L

-

K

-

K

-

S

Y
x
F

G

G

E

S

S

L

H

E

I
x
V

L

L

H

K

G

G

V

I

D

N

L

V

V

H

V

I

G

R

R

E

G

G

E

E

L

V

V

V

T

V

L

V

L

I

G

G

R

P

N
x
S

G
|
G

A

S

G
|
G

R
x
K

S
|
S

T
|
T

T

F

L

L

R

R

A

C

I

L

M

N

N

L

M

L

V

E

G

D

R

F

R

D

T

E

G

G

S

E

I

I

V

I

V

I

N

D

G

G

N

-

E

-

T

-

I

I

G

N

M

L

P

K

A

A

H

K

Q

D

I

T

P

N

-

L

-

N

-

K

-

V

R

R

L

E

G

E

V

V

G

G

Y

M

C

V

P

F

E

Q

E

R

R

F

G

N

I

L

F

F

A

P

S

H

L

M

S

T

V

V

E

L

E

N

N

N

L

I

L

T

L

L

P

A

P

P

-

M

T

K

V

V

R

R

S

K

G

W

G

P

M

R

S

E

L

K

D

A

E

E

L

A

Y

K

E

A

M

M

-

E

-

L

-

L

-

D

F

K

P

V

N

G

L

L

Y

K

E

D

R

K

R

A

F

H

S

A

Q

Y

G

P

T

D

R

S

L

L

S

S

G

G

G

G

E

Q

Q

A

Q

Q

M

R

L

V

A

A

M

I

A

A

R

R

I

A

L

L

R

A

T

M

G

E

A

P

N

K

L

I

L

M

L

L

L

F

D
|
D

E

E

I

P

T

T

E

S

G

A

L

L

A

D

P

P

V

E

I

M

V

V

Q

G

K

E

L

V

G

L

E

S

V

V

L

M

I

K

K

Q

L

L

K

A

Q

N

R

E

G

G

L

M

T

T

I

M

V

V

L

V

V

V

E

T

Q

H

N

E

F

M

R

G

F

F

A

A

A

R

P

E

L

V

A

G

D

D

R

R

H

V

Y

L

V

F

M

M

E

D

H

G

G

G

R

Y

I

I

I

I

E

E

E

E

I

G

E

K

A

P

A

E

D

D

L

L

binding phosphoaminophosphonic acid-adenylate ester: F13 (≠ Y19), V18 (≠ I24), S38 (≠ N44), G39 (= G45), G41 (= G47), K42 (≠ R48), S43 (= S49), T44 (= T50)
binding magnesium ion: S43 (= S49), D163 (= D163)

2olkA Abc protein artp in complex with adp-beta-s
30% identity, 91% coverage: 10:225/238 of query aligns to 1:225/242 of 2olkA

query
sites
2olkA

L

L

R

Q

V

M

S

I

D

D

L

V

H

H

A

Q

F

L

-

K

-

K

-

S

Y
x
F

G

G

E

S

S

L

H

E

I
x
V

L

L

H

K

G

G

V

I

D

N

L

V

V

H

V

I

G

R

R

E

G

G

E

E

L

V

V

V

T

V

L

V

L

I

G

G

R

P

N
x
S

G
|
G

A
x
S

G
|
G

R
x
K

S
|
S

T
|
T

T

F

L

L

R

R

A

C

I

L

M

N

N

L

M

L

V

E

G

D

R

F

R

D

T

E

G

G

S

E

I

I

V

I

V

I

N

D

G

G

N

-

E

-

T

-

I

I

G

N

M

L

P

K

A

A

H

K

Q

D

I

T

P

N

-

L

-

N

-

K

-

V

R

R

L

E

G

E

V

V

G

G

Y

M

C

V

P

F

E

Q

E

R

R

F

G

N

I

L

F

F

A

P

S

H

L

M

S

T

V

V

E

L

E

N

N

N

L

I

L

T

L

L

P

A

P

P

-

M

T

K

V

V

R

R

S

K

G

W

G

P

M

R

S

E

L

K

D

A

E

E

L

A

Y

K

E

A

M

M

-

E

-

L

-

L

-

D

F

K

P

V

N

G

L

L

Y

K

E

D

R

K

R

A

F

H

S

A

Q

Y

G

P

T

D

R

S

L

L

S

S

G

G

G

G

E

Q

Q

A

Q

Q

M

R

L

V

A

A

M

I

A

A

R

R

I

A

L

L

R

A

T

M

G

E

A

P

N

K

L

I

L

M

L

L

L

F

D

D

E

E

I

P

T

T

E

S

G

A

L

L

A

D

P

P

V

E

I

M

V

V

Q

G

K

E

L

V

G

L

E

S

V

V

L

M

I

K

K

Q

L

L

K

A

Q

N

R

E

G

G

L

M

T

T

I

M

V

V

L

V

V

V

E

T

Q

H

N

E

F

M

R

G

F

F

A

A

A

R

P

E

L

V

A

G

D

D

R

R

H

V

Y

L

V

F

M

M

E

D

H

G

G

G

R

Y

I

I

I

I

E

E

E

E

I

G

E

K

A

P

A

E

D

D

L

L

binding 5'-o-[(r)-hydroxy(thiophosphonooxy)phosphoryl]adenosine: F13 (≠ Y19), V18 (≠ I24), S38 (≠ N44), G39 (= G45), S40 (≠ A46), G41 (= G47), K42 (≠ R48), S43 (= S49), T44 (= T50)

2oljA Abc protein artp in complex with adp/mg2+
30% identity, 91% coverage: 10:225/238 of query aligns to 1:225/242 of 2oljA

query
sites
2oljA

L

L

R

Q

V

M

S

I

D

D

L

V

H

H

A

Q

F

L

-

K

-

K

-

S

Y
x
F

G

G

E

S

S

L

H

E

I
x
V

L

L

H

K

G

G

V

I

D

N

L

V

V

H

V

I

G

R

R

E

G

G

E

E

L

V

V

V

T

V

L

V

L

I

G

G

R

P

N
x
S

G
|
G

A
x
S

G
|
G

R
x
K

S
|
S

T
|
T

T

F

L

L

R

R

A

C

I

L

M

N

N

L

M

L

V

E

G

D

R

F

R

D

T

E

G

G

S

E

I

I

V

I

V

I

N

D

G

G

N

-

E

-

T

-

I

I

G

N

M

L

P

K

A

A

H

K

Q

D

I

T

P

N

-

L

-

N

-

K

-

V

R

R

L

E

G

E

V

V

G

G

Y

M

C

V

P

F

E

Q

E

R

R

F

G

N

I

L

F

F

A

P

S

H

L

M

S

T

V

V

E

L

E

N

N

N

L

I

L

T

L

L

P

A

P

P

-

M

T

K

V

V

R

R

S

K

G

W

G

P

M

R

S

E

L

K

D

A

E

E

L

A

Y

K

E

A

M

M

-

E

-

L

-

L

-

D

F

K

P

V

N

G

L

L

Y

K

E

D

R

K

R

A

F

H

S

A

Q

Y

G

P

T

D

R

S

L

L

S

S

G

G

G

G

E

Q

Q

A

Q

Q

M

R

L

V

A

A

M

I

A

A

R

R

I

A

L

L

R

A

T

M

G

E

A

P

N

K

L

I

L

M

L

L

L

F

D

D

E

E

I

P

T

T

E

S

G

A

L

L

A

D

P

P

V

E

I

M

V

V

Q

G

K

E

L

V

G

L

E

S

V

V

L

M

I

K

K

Q

L

L

K

A

Q

N

R

E

G

G

L

M

T

T

I

M

V

V

L

V

V

V

E

T

Q

H

N

E

F

M

R

G

F

F

A

A

A

R

P

E

L

V

A

G

D

D

R

R

H

V

Y

L

V

F

M

M

E

D

H

G

G

G

R

Y

I

I

I

I

E

E

E

E

I

G

E

K

A

P

A

E

D

D

L

L

binding adenosine-5'-diphosphate: F13 (≠ Y19), V18 (≠ I24), S38 (≠ N44), G39 (= G45), S40 (≠ A46), G41 (= G47), K42 (≠ R48), S43 (= S49), T44 (= T50)

1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
24% identity, 88% coverage: 10:219/238 of query aligns to 5:231/253 of 1g9xB

query
sites
1g9xB

L

L

R

R

V

T

S

E

D

N

L

I

H

V

A

K

F

Y

Y
x
F

G

G

E

E

S
x
F

H

K

I

A

L

L

H

D

G

G

V

V

D

S

L

I

V

S

V

V

G

C

R

K

G

G

E

D

L

V

V

T

T

L

L

I

L

I

G

G

R

P

N

N

G
|
G

A
x
S

G
|
G

R
x
K

S
|
S

T
|
T

T

L

L

I

R

N

A

V

I

I

M

T

N

G

M

F

V

L

G

K

R

A

R

D

T

E

G

G

S

R

I

V

V

Y

V

F

N

E

G

N

N

K

E

D

T

I

I

T

G

N

M

K

P

E

A

P

H

A

Q

E

I

L

P

Y

R

H

L

Y

G

G

V

I

G

V

Y

R

C

T

P

F

E

Q

E

T

R

P

G

Q

I

P

F

L

A

K

S

E

L

M

S

T

V

V

E

L

E

E

N

N

L

L

L

L

L

I

P

G

P

-

T

E

V

I

R

N

S

P

G

G

G

E

M

S

S

P

L

L

D

N

E

S

L

L

Y

F

-

Y

-

K

-

K

-

W

-

I

-

P

-

K

-

E

-

E

E

E

M

M

-

V

-

E

-

K

-

A

-

F

-

K

-

I

-

L

-

E

-

F

-

L

-

K

F

L

P

S

N

H

L

L

Y

Y

E

D

R

R

R

K

F

A

S

G

Q

E

G

-

T

-

R

-

L

L

S

S

G

G

G

G

E

Q

Q

M

Q

K

M

L

L

V

A

E

M

I

A

G

R

R

I

A

L

L

R

M

T

T

G

N

A

P

N

K

L

M

L

I

L

V

L

M

D

D

E
|
E

I

P

T

I

E

A

G

G

L

V

A

A

P

P

V

G

I

L

V

A

Q

H

K

D

L

I

G

F

E

N

V

H

L

V

I

L

K

E

L

L

K

K

Q

A

R

K

G

G

L

I

T

T

I

F

V

L

L

I

V

I

E

E

Q

H

N

R

F

L

R

D

F

I

A

V

A

L

P

N

L

Y

A

I

D

D

R

H

H

L

Y

Y

V

V

M

M

E

F

H

N

G

G

R

Q

I

I

I

I

E

A

E

E

binding adenosine-5'-diphosphate: F14 (≠ Y19), F17 (≠ S22), G40 (= G45), S41 (≠ A46), G42 (= G47), K43 (≠ R48), S44 (= S49), T45 (= T50)
binding magnesium ion: S44 (= S49), E176 (= E164)

3vx4D Crystal structure of the nucleotide-binding domain of s. Mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway (see paper)
27% identity, 87% coverage: 25:231/238 of query aligns to 24:234/240 of 3vx4D

query
sites
3vx4D

L

L

H

S

G

D

V

I

D

N

L

L

V

S

V

I

G

K

R

K

G

G

E

S

L

K

V

V

T

S

L

L

L

V

G

G

R

A

N
x
S

G
|
G

A

S

G
|
G

R
x
K

S
x
T

T
|
T

T

L

L

A

R

K

A

L

I

I

M

V

N

N

M

F

V

Y

G

E

R

P

R

N

T

K

G

G

S

I

I

V

V

R

V

I

N

N

G

G

N

N

E

D

T

L

I

K

G

V

M

I

P

D

A

K

H

T

Q

A

I

L

P

R

R

R

L

-

G

H

V

I

G

S

Y

Y

C

L

P

P

E
x
Q

E

Q

R

A

G

Y

I

V

F

F

A

S

S

G

L

-

S

S

V

I

E

M

E

D

N

N

L

L

L

V

L

L

P

G

P

A

T

-

V

-

R

-

S

K

G

E

G

G

M

T

S

S

L

Q

D

E

E

D

L

I

Y

I

-

R

-

A

-

C

-

E

-

I

-

A

-

E

-

I

-

R

-

S

-

D

-

I

E

E

M

Q

F

M

P

P

N

Q

L

G

Y

Y

E

Q

R

T

R

E

F

L

S

S

Q

D

G

G

T

A

R
x
G

L
x
I

S
|
S

G

G

G
|
G

E
x
Q

Q

K

Q

Q

M

R

L

I

A

A

M

L

A

A

R

R

I

A

L

L

R

L

T

T

G

Q

A

A

N

P

L

V

L

L

L

I

L

L

D

D

E

A

I

A

T

T

E

S

G

S

L

L

A

D

P

I

V

L

I

T

V

E

Q

K

K

K

L

I

G

I

E

S

V

N

L

L

I

L

K

Q

L

M

K

T

Q

E

R

K

G

-

L

-

T

T

I

I

V

I

L

F

V

V

E

A

Q
x
H

N

R

F

L

R

S

F

I

A

S

A

Q

P

R

L

-

A

T

D

D

R

E

H

V

Y

I

V

V

M

M

E

D

H

Q

G

G

R

K

I

I

I

V

E

E

E

Q

I

G

E

T

A

H

A

K

D

E

L

L

D

L

S

A

K

K

K

Q

D

G

F

F

binding adenosine-5'-triphosphate: S43 (≠ N44), G44 (= G45), G46 (= G47), K47 (≠ R48), T48 (≠ S49), T49 (= T50), Q89 (≠ E91), G144 (≠ R138), I145 (≠ L139), S146 (= S140), G148 (= G142), Q149 (≠ E143), H200 (≠ Q196)
binding magnesium ion: T48 (≠ S49), Q89 (≠ E91)

Sites not aligning to the query:

binding adenosine-5'-triphosphate: 17, 23

1g6hA Crystal structure of the adp conformation of mj1267, an atp- binding cassette of an abc transporter (see paper)
24% identity, 88% coverage: 10:219/238 of query aligns to 5:231/254 of 1g6hA

query
sites
1g6hA

L

L

R

R

V

T

S

E

D

N

L

I

H

V

A

K

F

Y

Y
x
F

G

G

E

E

S
x
F

H

K

I

A

L

L

H

D

G

G

V

V

D

S

L

I

V

S

V

V

G

N

R

K

G

G

E

D

L

V

V

T

T

L

L

I

L

I

G

G

R

P

N
|
N

G
|
G

A

S

G
|
G

R
x
K

S
|
S

T
|
T

T

L

L

I

R

N

A

V

I

I

M

T

N

G

M

F

V

L

G

K

R

A

R

D

T

E

G

G

S

R

I

V

V

Y

V

F

N

E

G

N

N

K

E

D

T

I

I

T

G

N

M

K

P

E

A

P

H

A

Q

E

I

L

P

Y

R

H

L

Y

G

G

V

I

G

V

Y

R

C

T

P

F

E

Q

E

T

R

P

G

Q

I

P

F

L

A

K

S

E

L

M

S

T

V

V

E

L

E

E

N

N

L

L

L

L

L

I

P

G

P

-

T

E

V

I

R

C

S

P

G

G

G

E

M

S

S

P

L

L

D

N

E

S

L

L

Y

F

-

Y

-

K

-

K

-

W

-

I

-

P

-

K

-

E

-

E

E

E

M

M

-

V

-

E

-

K

-

A

-

F

-

K

-

I

-

L

-

E

-

F

-

L

-

K

F

L

P

S

N

H

L

L

Y

Y

E

D

R

R

R

K

F

A

S

G

Q

E

G

-

T

-

R

-

L

L

S

S

G

G

G

G

E

Q

Q

M

Q

K

M

L

L

V

A

E

M

I

A

G

R

R

I

A