Comparing GFF1235 FitnessBrowser__psRCH2:GFF1235 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1u08A Crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. (see paper)
55% identity, 98% coverage: 4:379/382 of query aligns to 6:379/382 of 1u08A
2o0rA The three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis (see paper)
38% identity, 99% coverage: 3:382/382 of query aligns to 3:383/385 of 2o0rA
Q17CS8 Kynurenine aminotransferase; AeKAT; EC 2.6.1.-; EC 2.6.1.63; EC 2.6.1.7 from Aedes aegypti (Yellowfever mosquito) (Culex aegypti) (see 2 papers)
34% identity, 96% coverage: 12:379/382 of query aligns to 73:470/477 of Q17CS8
Sites not aligning to the query:
2r5eA Aedes kynurenine aminotransferase in complex with glutamine (see paper)
34% identity, 96% coverage: 12:379/382 of query aligns to 15:412/419 of 2r5eA
2r5cB Aedes kynurenine aminotransferase in complex with cysteine (see paper)
34% identity, 96% coverage: 12:379/382 of query aligns to 15:412/419 of 2r5cB
5verA Mouse kynurenine aminotransferase iii, re-refinement of the PDB structure 3e2z (see paper)
33% identity, 98% coverage: 4:377/382 of query aligns to 3:404/410 of 5verA
Sites not aligning to the query:
5vepA Mouse kynurenine aminotransferase iii, re-refinement of the PDB structure 3e2f (see paper)
33% identity, 98% coverage: 4:377/382 of query aligns to 3:404/410 of 5vepA
Sites not aligning to the query:
3e2zA Crystal structure of mouse kynurenine aminotransferase iii in complex with kynurenine (see paper)
33% identity, 98% coverage: 4:377/382 of query aligns to 3:404/410 of 3e2zA
3e2yA Crystal structure of mouse kynurenine aminotransferase iii in complex with glutamine (see paper)
33% identity, 98% coverage: 4:377/382 of query aligns to 3:404/410 of 3e2yA
1yiyA Aedes aegypti kynurenine aminotransferase (see paper)
34% identity, 96% coverage: 12:379/382 of query aligns to 14:411/418 of 1yiyA
4wljA High resolution crystal structure of human kynurenine aminotransferase-i in complex with aminooxyacetate (see paper)
33% identity, 98% coverage: 5:379/382 of query aligns to 6:406/413 of 4wljA
1w7nA Crystal structure of human kynurenine aminotransferase i in pmp form (see paper)
33% identity, 98% coverage: 5:379/382 of query aligns to 6:409/415 of 1w7nA