Comparing GFF1248 FitnessBrowser__Phaeo:GFF1248 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
34% identity, 99% coverage: 1:249/251 of query aligns to 2:254/254 of 1g6hA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
34% identity, 99% coverage: 1:248/251 of query aligns to 2:253/253 of 1g9xB
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
29% identity, 99% coverage: 2:249/251 of query aligns to 1:236/240 of 6mjpA
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
28% identity, 98% coverage: 3:248/251 of query aligns to 6:238/240 of 1ji0A
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp (see paper)
29% identity, 99% coverage: 3:250/251 of query aligns to 2:242/253 of 6z5uK
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation (see paper)
29% identity, 99% coverage: 3:250/251 of query aligns to 4:244/263 of 7d0aB
7d08B Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
29% identity, 99% coverage: 3:250/251 of query aligns to 4:244/263 of 7d08B
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
29% identity, 91% coverage: 3:230/251 of query aligns to 4:222/501 of P04983
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
30% identity, 98% coverage: 4:249/251 of query aligns to 3:236/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
30% identity, 98% coverage: 4:249/251 of query aligns to 3:236/238 of 6s8gA
1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
28% identity, 94% coverage: 6:240/251 of query aligns to 6:232/353 of 1oxvD
1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
28% identity, 94% coverage: 6:240/251 of query aligns to 6:232/353 of 1oxvA
1oxuA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
28% identity, 94% coverage: 6:240/251 of query aligns to 6:232/353 of 1oxuA
Q97UY8 Glucose import ATP-binding protein GlcV; EC 7.5.2.- from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
28% identity, 94% coverage: 6:240/251 of query aligns to 6:232/353 of Q97UY8
6mbnA Lptb e163q in complex with atp (see paper)
29% identity, 98% coverage: 4:249/251 of query aligns to 4:237/241 of 6mbnA
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
30% identity, 98% coverage: 4:248/251 of query aligns to 3:235/235 of 6mhzA
3c4jA Abc protein artp in complex with atp-gamma-s
27% identity, 95% coverage: 3:241/251 of query aligns to 3:230/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
27% identity, 95% coverage: 3:241/251 of query aligns to 3:230/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
27% identity, 95% coverage: 3:241/251 of query aligns to 3:230/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
27% identity, 95% coverage: 3:241/251 of query aligns to 3:230/242 of 2oljA
>GFF1248 FitnessBrowser__Phaeo:GFF1248
MGILEVKNVGKRFGGLQALSDVNLSVRENTVHAIIGPNGAGKSTLLNCLVGKLIPDTGSV
MFDGKSVLGRAPYEINQMGISRVFQTPEIFGDLSVLENMMIPCFAKRDGAFEMNAISAVS
GQRDILEKAEHMLEEMNMADKRHMNAASMSRGDKRRLEIGMCLSQEPRLLLLDEPTAGMA
RADTNNTIDLLKQIKSERDITIAIIEHDMHVVFSLADRITVLAQGTPLVEDDPQNIKGNP
KVREAYLGESA
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Lawrence Berkeley National Laboratory