Comparing GFF1729 FitnessBrowser__WCS417:GFF1729 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
Q9X1S1 D-glycerate 2-kinase; GCK; EC 2.7.1.165 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
41% identity, 98% coverage: 4:419/426 of query aligns to 3:417/417 of Q9X1S1
>GFF1729 FitnessBrowser__WCS417:GFF1729
MSVDPQHLLRELFATAIDAAHPRQVLEPYLPADRSGRVIVIGAGKAAAAMALVVENVWQG
EVTGLVVTRYGHGAPCQKIEVVEAAHPVPDAAGLAVAQRVLALISNLTEHDRVIFLLSGG
GSALLALPAEGITLADKQAINKALLKSGATIGEMNCVRKHLSAIKGGRLAKAAWPATVYT
YAISDVPGDQATVIASGPTVGDPSTSQQALAILKRYNIDAPASVRSWLQNPASETVKPGD
PVLARSHFQLIARPQQSLEAVAVKVRQAGFSPLILGDLEGEARDVAKVHAGIARQIVQHG
QPLAAPCVILSGGETTVTVRGNGRGGRNAEFLLSLTDSLKGLPGVYALAGDTDGIDGSED
NAGAIMTPCSYSRAEALGLSASDELDNNNGYGYFAALDGLIITEPTRTNVNDFRAILILE
TAKHDA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory