Comparing GFF2321 FitnessBrowser__Marino:GFF2321 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
Q54VI3 Glutamate dehydrogenase 2; NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Dictyostelium discoideum (Social amoeba) (see paper)
22% identity, 31% coverage: 689:1186/1628 of query aligns to 428:895/1042 of Q54VI3
>GFF2321 FitnessBrowser__Marino:GFF2321
MNALTVASKDQFFEQLADAFAKKISKTEAKKISEFAKQHYAHIPLEELVSRRFADTYGAV
LAAWQFLQKRSAEETPVAVFNPDLESDGWQSTHTVVFILHPNIPFLIDSLRIAINHREIG
THSIQHSILQVNRDQNGKLEKLHTSKKKASGSDYEAFIVLEIDRHSNPEDLRDLEDTLQN
VLHEVRIAVSDFPVVTEKVNEILGELDNTTAGINEEQKEEARAFLEWLARDHFTFLGYDE
YDFAKDKSGMVVRRVENSELGILRVNNERPDRVRLNELPQRTRHEMTRSDDIFIFAKSAQ
RSRVHRPAYPDYIAVKKFNSKGEVVGERRFLGLYTARVYNERPDEIPLLRRKFQSVMKRS
GFLRDDYAGKELEQILTVYPRDELFQIEQDELLKVAKSILYIQERRRIELFLREDVYGQF
VTCLAFFPRDIYNTELRLKVEQVLVDRLGAEDVEFVTHFSESVLARVQFTIRVPQVENRQ
LPTAEIREKVIELAQSWRDGLSEALSEAWGEEQGNELYRLWAGGFPASYTDMFSPRRAAI
DLEHIASSANNHDLAMSFYRALEEDESTLHFKLFYPDEPLPLSDVMPIFDNLGFRVIGEH
PFEVIDRHNKTVWIHDFTLQAHQGTVVDIHRIRPIFEELFRRVWYGEAENDAFNRMLLSS
YMSWREIALLRTYARYMRQIRFSNSQTFISNTLVNHVELTRLLLEFFEIRFNPERYQSPG
KSQAAQQKLEIEFNAGLENVENLSEDRVLRLYLELIQATLRTNYYQHGESGGPKPYISVK
FDPSRIPDMPLPMPMFEIFVYSPRVEGVHLRGGKVARGGLRWSDRFEDYRTEILGLVKAQ
QVKNAVIVPVGAKGGFVAKRLPDPSDREAFQAEGIEAYKTFIRGLLDITDNLVDAGIAPP
ERVIRHDDDDHYLVVAADKGTATFSDIANGLAAEYGFWMGDAFASGGSNGYDHKKMGITA
RGAWVSVERHFREMGINPGLDEFTAIGIGDMGGDVFGNGMLCSEKTKLVAAFNHVHIFVD
PSPDPEKSYKERMRLFGLPRSAWTDYDSKLISKGGGVFSRNSKSIPVSPEMKKLLGIKSD
RVPPNMLISHILKAQVDLLWVGGIGTYVKAASESHSDVGDKANDGLRINGSDLRCKVVGE
GGNLGLTQLGRIEFALKGGRLNTDFIDNSGGVDCSDHEVNMKILLNRAVAMGDLTNKQRN
IMLEEMTDDVAELVLKNNYRQTQAISIASEDAATRLEEYRRLMNTFESEGKLNRALEFLP
DDETLSERKLDKKGLTRPELSVLISYVKGDLKQTLIDSTLPDDPLLAGEMYKVFPRDLTQ
KFSKELGEHQLRREIIATQIANDMVNHMGITFVERLNQSTGADAASIALAWIIARDVFRI
DNWWDRIEALDFHVSAQLQMELMQDLMRLMRRSVRWLLRNRRAELSIQHHMERFADSVWA
ITAGLPEYLGDQAKTTWEKRHQALVDAGLPSELASVVSGTGHLYSSLGIIEAHEASGMPL
KTVANLYYELGDRLDLNWFASAIASLQPGSHWQALARESFREDLDWQQRALTTGVLKLAD
KPEDVPACVEAWLSRHQQMIDRWKSMLSELKGVREPEYAMFSVALRELLDLAQSTMHQPH
AEVEVQTN
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory