Comparing GFF2621 FitnessBrowser__Phaeo:GFF2621 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q72J02 Sulfur carrier protein adenylyltransferase; E1-like protein TtuC; Sulfur carrier protein MoaD adenylyltransferase; Sulfur carrier protein ThiS adenylyltransferase; Sulfur carrier protein TtuB adenylyltransferase; tRNA two-thiouridine-synthesizing protein C; EC 2.7.7.80; EC 2.7.7.73; EC 2.7.7.- from Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) (see paper)
50% identity, 65% coverage: 100:346/378 of query aligns to 2:252/271 of Q72J02
Sites not aligning to the query:
O59954 Adenylyltransferase and sulfurtransferase uba4; Common component for nitrate reductase and xanthine dehydrogenase protein F; Ubiquitin-like protein activator 4; EC 2.7.7.80; EC 2.8.1.11 from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) (see paper)
45% identity, 65% coverage: 105:350/378 of query aligns to 65:322/482 of O59954
Q9VLJ8 Adenylyltransferase and sulfurtransferase MOCS3; Molybdenum cofactor synthesis protein 3; Ubiquitin activating enzyme 4; EC 2.7.7.80; EC 2.8.1.11 from Drosophila melanogaster (Fruit fly) (see paper)
40% identity, 70% coverage: 84:348/378 of query aligns to 42:311/453 of Q9VLJ8
D4GSF3 SAMP-activating enzyme E1; Ubiquitin-like activating enzyme of archaea; Ubl-activating enzyme; EC 2.7.7.- from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
46% identity, 68% coverage: 104:361/378 of query aligns to 8:264/270 of D4GSF3
P38820 Adenylyltransferase and sulfurtransferase UBA4; Needs CLA4 to survive protein 3; Ubiquitin-like protein activator 4; EC 2.7.7.-; EC 2.8.1.- from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 4 papers)
40% identity, 71% coverage: 79:348/378 of query aligns to 17:290/440 of P38820
Sites not aligning to the query:
P12282 Molybdopterin-synthase adenylyltransferase; MoaD protein adenylase; Molybdopterin-converting factor subunit 1 adenylase; Sulfur carrier protein MoaD adenylyltransferase; EC 2.7.7.80 from Escherichia coli (strain K12) (see 2 papers)
42% identity, 65% coverage: 100:346/378 of query aligns to 3:247/249 of P12282
1jwbB Structure of the covalent acyl-adenylate form of the moeb-moad protein complex (see paper)
41% identity, 65% coverage: 100:346/378 of query aligns to 2:239/240 of 1jwbB
1jw9B Structure of the native moeb-moad protein complex (see paper)
41% identity, 65% coverage: 100:346/378 of query aligns to 2:239/240 of 1jw9B
O95396 Adenylyltransferase and sulfurtransferase MOCS3; Molybdenum cofactor synthesis protein 3; Molybdopterin synthase sulfurylase; MPT synthase sulfurylase; EC 2.7.7.80; EC 2.8.1.11 from Homo sapiens (Human) (see 5 papers)
45% identity, 65% coverage: 85:328/378 of query aligns to 39:281/460 of O95396
Sites not aligning to the query:
1jwaB Structure of the atp-bound moeb-moad protein complex (see paper)
39% identity, 63% coverage: 100:337/378 of query aligns to 2:215/217 of 1jwaB
P30138 Sulfur carrier protein ThiS adenylyltransferase; EC 2.7.7.73 from Escherichia coli (strain K12) (see 3 papers)
40% identity, 67% coverage: 101:353/378 of query aligns to 1:251/251 of P30138
6yubA Crystal structure of uba4 from chaetomium thermophilum (see paper)
42% identity, 55% coverage: 101:309/378 of query aligns to 6:211/423 of 6yubA
Sites not aligning to the query:
6yubB Crystal structure of uba4 from chaetomium thermophilum (see paper)
42% identity, 55% coverage: 101:309/378 of query aligns to 7:210/289 of 6yubB
Sites not aligning to the query:
1zfnA Structural analysis of escherichia coli thif (see paper)
39% identity, 65% coverage: 101:346/378 of query aligns to 1:243/244 of 1zfnA
1zud3 Structure of this-thif protein complex (see paper)
40% identity, 66% coverage: 101:348/378 of query aligns to 1:240/240 of 1zud3
O42939 Ubiquitin-activating enzyme E1-like; Pmt3-activating enzyme subunit 2 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
30% identity, 43% coverage: 124:287/378 of query aligns to 21:182/628 of O42939
Sites not aligning to the query:
Q7SXG4 SUMO-activating enzyme subunit 2; Ubiquitin-like 1-activating enzyme E1B; Ubiquitin-like modifier-activating enzyme 2; EC 2.3.2.- from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
30% identity, 46% coverage: 115:287/378 of query aligns to 1:175/650 of Q7SXG4
Sites not aligning to the query:
3h9jA Crystal structure of e. Coli mccb + ampcpp + semet mcca (see paper)
26% identity, 71% coverage: 80:347/378 of query aligns to 55:335/339 of 3h9jA
Sites not aligning to the query:
3h5nA Crystal structure of e. Coli mccb + atp (see paper)
26% identity, 71% coverage: 80:347/378 of query aligns to 55:335/338 of 3h5nA
Sites not aligning to the query:
O65041 NEDD8-activating enzyme E1 catalytic subunit; RUB-activating enzyme; Ubiquitin-activating enzyme E1-like protein; EC 6.2.1.64 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
31% identity, 45% coverage: 120:289/378 of query aligns to 36:218/454 of O65041
>GFF2621 FitnessBrowser__Phaeo:GFF2621
MLSIVVLAALIWWGGRFLGLGHTLRLGLLGVLYIAILAVHLTLPETAPLRGATGGSAAPW
LVLAGMVVLVLAYRHLLRRLRSRAQPEEDAEGGAKPRPDKFSESELDRYARHIVLRELGG
PGQKKLRKARVLVIGAGGLGAPALQYLAAAGVGTIGVIDDDLVENANLQRQVIHRDQDIG
IPKVFSAQAAMEAQNPYVTVRPYHRRLDADIATDLFGDYDLILDGTDNFETRYLVNRTAV
ALGKPLISGALSQWEGQISLFHPTAGGPCYQCIFPEAPAAGLAPSCSEAGVVGPLPGVVG
AMMALEAIKAVTGAGQTLQGEILIYDGLYSESRKITLSQRSDCPICAGGAGPVEETGKKE
TRKETGALHSDAGSSETI
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory