Comparing GFF3195 FitnessBrowser__Phaeo:GFF3195 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
2q7sB Crystal structure of n-formylglutamate amidohydrolase (yp_297560.1) from ralstonia eutropha jmp134 at 2.00 a resolution
38% identity, 92% coverage: 6:267/286 of query aligns to 4:266/280 of 2q7sB
>GFF3195 FitnessBrowser__Phaeo:GFF3195
MSDTVYLVEMPQELRSGVVFASPHSGSDYSAAFLAQTILDPLQLRSSEDAFVDELFAAAP
RFGMPLLTARAPRAYVDLNRSTEELDPALIEGVIKRGQNPRVASGLGVVPRVVAHGRAIY
HGKLSQCEARRRIESYWRPYHAALQQLLDQARIGFGQAVLIDCHSMPHEAISAAGRRGAG
LPDVVLGDRFGAAASSEVMDRVEAAFVGAGLRVARNTPFAGAYITQTYGRPSRAQHAVQV
EIDRSLYMNEARIEKTADFAALQMVLTDVIAELSQLNCDPVPLAAE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory