Comparing GFF3567 FitnessBrowser__Phaeo:GFF3567 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
8oriD Crystal structure of rhizobium etli l-asparaginase reaiv (orthorhombic) (see paper)
40% identity, 98% coverage: 2:329/333 of query aligns to 7:337/341 of 8oriD
7os3AAA L-asparaginase II protein (see paper)
32% identity, 94% coverage: 13:325/333 of query aligns to 16:348/369 of 7os3AAA
>GFF3567 FitnessBrowser__Phaeo:GFF3567
MMTNPVPMTEVWRGPLLESLHLGHAVVCNAKGEIVRSWGDPDAVIYPRSSAKMIQALPLI
TSGAAAKYGLTSEQLALACASHNGAEIHTSRVNAWLDQLSMTDHDFRCGPQLPDDIPARN
ALIKTDTSPCQVHNNCSGKHAGFLTLSQHLGAGPEYVEIDHPVQQACRSAFEQVTEEVSP
GYGIDGCSAPNFATSVKGLARAMAWFAAASDRSDRDADAAQELVSAMMAHPELVAGETRA
CTNLMRAMGGTVAIKTGAEAVFIAILPEQKLGVALKITDGATRASECAIASILVGLGVLD
ADHPATLKYRNAPLINRRGIDCGSIRPSAEMTF
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory