Comparing GFF3580 FitnessBrowser__Phaeo:GFF3580 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 11 hits to proteins with known functional sites (download)
2puzB Crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l-glutamate (see paper)
61% identity, 98% coverage: 11:404/404 of query aligns to 7:402/404 of 2puzB
2gokA Crystal structure of the imidazolonepropionase from agrobacterium tumefaciens at 1.87 a resolution (see paper)
61% identity, 98% coverage: 11:404/404 of query aligns to 7:402/404 of 2gokA
Q8U8Z6 Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 2 papers)
61% identity, 98% coverage: 11:404/404 of query aligns to 21:416/419 of Q8U8Z6
A0KF84 Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) (see paper)
49% identity, 98% coverage: 11:404/404 of query aligns to 14:407/411 of A0KF84
2oofA The crystal structure of 4-imidazolone-5-propanoate amidohydrolase from environmental sample
48% identity, 98% coverage: 11:404/404 of query aligns to 9:400/403 of 2oofA
2q09A Crystal structure of imidazolonepropionase from environmental sample with bound inhibitor 3-(2,5-dioxo-imidazolidin-4-yl)-propionic acid (see paper)
48% identity, 98% coverage: 11:404/404 of query aligns to 8:399/402 of 2q09A
2g3fA Crystal structure of imidazolonepropionase complexed with imidazole-4- acetic acid sodium salt, a substrate homologue (see paper)
36% identity, 99% coverage: 5:403/404 of query aligns to 5:409/414 of 2g3fA
2bb0A Structure of imidazolonepropionase from bacillus subtilis (see paper)
36% identity, 99% coverage: 5:403/404 of query aligns to 4:408/413 of 2bb0A
P42084 Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis (strain 168) (see paper)
36% identity, 99% coverage: 5:403/404 of query aligns to 6:410/421 of P42084
4c5yA Crystal structure of a. Niger ochratoxinase (see paper)
25% identity, 85% coverage: 32:375/404 of query aligns to 26:389/436 of 4c5yA
A2R2V4 Ochratoxinase; OTase; Amidohydrolase 2; Amidase 2; Carboxypeptidase Am2; EC 3.4.17.- from Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) (see 2 papers)
25% identity, 85% coverage: 32:375/404 of query aligns to 70:433/480 of A2R2V4
>GFF3580 FitnessBrowser__Phaeo:GFF3580
MGDTDSYLICDATLATMTGSDPAYGLVPDGLIVVQNGWIRWCGSEAQLPKDYSDWPRVSM
GGRLVTPGLIDCHTHIVFGGNRAMEFEMRLNGASYEDVARAGGGIVSTVSATRTASLEDL
VQGALPRLDALIAEGATVVEVKSGYGLDRETELNMLRAARRLAVLRSVTVNTTFLGAHAT
PGEYKGRDDAYIDEVCIPALRAAHAEGLVDAVDGFCENIAFAPAQIERVFKAARELGLPV
KLHAEQLSHQGGTALSAQYGALSVDHVEYATEDDAKMMAAAGSVAVILPGAFYTIREIQA
PPIEHFRSHGVPMALATDCNPGSSPLTSLLLTMNMGCTLFRMTPEEALAGVTRNAASALG
LTDRGQISAGMRADLAVWDVETPGELAYRIGFNPLYTRIYEGNQ
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory