Comparing GFF3684 HP15_3626 betaine aldehyde dehydrogenase to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
4cazA Crystal structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa in complex with nadh
61% identity, 98% coverage: 11:489/489 of query aligns to 9:489/489 of 4cazA
2woxA Betaine aldehyde dehydrogenase from pseudomonas aeruginosa with NAD(p) h-catalytic thiol adduct. (see paper)
61% identity, 98% coverage: 11:489/489 of query aligns to 9:489/489 of 2woxA
2wmeA Crystallographic structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa (see paper)
61% identity, 98% coverage: 11:489/489 of query aligns to 9:489/489 of 2wmeA
Q9HTJ1 NAD/NADP-dependent betaine aldehyde dehydrogenase; BADH; EC 1.2.1.8 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
61% identity, 98% coverage: 11:489/489 of query aligns to 10:490/490 of Q9HTJ1
8skfA Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (lattice translocation disorder)
61% identity, 98% coverage: 9:489/489 of query aligns to 15:497/497 of 8skfA
8vr1A Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (ctp bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8vr1A
8vr0A Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (gmp bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8vr0A
8vqzA Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (cmp bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8vqzA
8vqwC Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (coa bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8vqwC
8vj3A Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (fad bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8vj3A
8uzoA Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (adp bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8uzoA
8uznA Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (amp bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8uznA
8uzmA Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (NADPH bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8uzmA
8uzkA Crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (NADP+ bound)
61% identity, 98% coverage: 9:489/489 of query aligns to 6:488/488 of 8uzkA
6wsbA Crystal structure of a betaine aldehyde dehydrogenase from burkholderia pseudomallei bound to cofactor NAD (see paper)
62% identity, 96% coverage: 11:480/489 of query aligns to 9:479/489 of 6wsbA
1bpwA Betaine aldehyde dehydrogenase from cod liver (see paper)
55% identity, 98% coverage: 10:489/489 of query aligns to 22:503/503 of 1bpwA
P56533 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABADH; Aldehyde dehydrogenase family 9 member A1; Betaine aldehyde dehydrogenase; BADH; EC 1.2.1.47; EC 1.2.1.3 from Gadus morhua subsp. callarias (Baltic cod) (Gadus callarias) (see paper)
55% identity, 98% coverage: 10:489/489 of query aligns to 22:503/503 of P56533
6vr6D Structure of aldh9a1 complexed with NAD+ in space group p1 (see paper)
54% identity, 94% coverage: 30:489/489 of query aligns to 33:493/493 of 6vr6D
P49189 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABALDH; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; Formaldehyde dehydrogenase; Gamma-aminobutyraldehyde dehydrogenase; R-aminobutyraldehyde dehydrogenase; EC 1.2.1.47; EC 1.2.1.3; EC 1.2.1.46; EC 1.2.1.19 from Homo sapiens (Human) (see 2 papers)
54% identity, 94% coverage: 30:489/489 of query aligns to 34:494/494 of P49189
Sites not aligning to the query:
6vwfA Structure of aldh9a1 complexed with NAD+ in space group c222 (see paper)
49% identity, 94% coverage: 30:489/489 of query aligns to 34:450/450 of 6vwfA
>GFF3684 HP15_3626 betaine aldehyde dehydrogenase
MSASLPVVQNFVHGRFLANSTGETFPVVNPATGQVIYEVEVADESVQQAAIESARAGFAE
WSAMTAIERSRILLRAVAILRERNDELAAAEVRDTGKPWQEAEAVDVVTGADAVEFFAGL
APSIEGNQQDLGGDFYYTRREPLGICAGIGAWNYPIQIACWKSAPALACGNAMIFKPSEE
TPMGAVKLAEIFTEAGVPAGVFNVVQGAAEVGQWLTHHPEIAKVSFTGEVATGKKVMAAA
SSTLKDVTMELGGKSPLIIFDDADLENAISAAMVGNFYTQGEICTNGTRVFVHEDLYPRF
IERLLERTRNNIKPGDPMNPDTNFGALISAKHRDLVLDYIAKGLSEGATLSHGGRAFEPE
DSKGGYFVEPTIFTDCTDDMTIVKEEIFGPVMSVLTFRDEDEVIARANNTDTGLAAGVFT
NDIRRAHRVIHQIQAGICWINSYGASPAEMPVGGYKLSGIGRENGRETIAHYTQIKSVYV
GMEDLDAPF
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory