SitesBLAST

Comparing GFF3787 FitnessBrowser__psRCH2:GFF3787 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>GFF3787 FitnessBrowser__psRCH2:GFF3787
MNSQLSVTPATKRPLLRLETVLILIGVIALALAPFYFYPIFLMKVLCFALFACAFNLLLG
YTGILSFGHAAFFGGAAYFTAHAVKEWGLTPELGILVGVAGAAFLGLIIGFLAIRRQGIY
STMITLALSQMFFFFCLQASFTHGEDGIQNIPRGHLFGLIDLEEPLYMYFFVLSVFLAGM
LLIWRVIHSPYGMILRSIRENENRAISLGYSVSRYKLGAFVMSAALAGLAGGLKALVFQF
ATLTDVSWQMSGEVVLMTLLGGIGTLVGPVFGAALVTTLGNYFATSELPVTLVTGIIFMV
CVLVFRRGMIGELYASRLGKKLERRADD

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SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.