Comparing GFF4207 FitnessBrowser__psRCH2:GFF4207 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
29% identity, 50% coverage: 62:211/300 of query aligns to 87:234/296 of P68183
>GFF4207 FitnessBrowser__psRCH2:GFF4207
MRRWSFSNLILVLGLLFIYLPMVILVIYSFNASRLVTVWGGWSLKWYAGLLDNSQLMGAV
MRSLEVAAYTAVAAVALGTMAAFVLTRIPVFRGRTLFGGLVTAPLVMPEVITGLSLLLLF
VAMAQLVGWPAQRGLVTIWIAHTTFCSAYVAVVVMARLRELDLSIEEAAMDLGARPWKVF
FLITMPMIAPSLAAGGMLSFALSLDDLVLASFVSGPGSTTLPMEIFSAVRLGVKPEINAV
ASLILLSVSLATFLAWYLTRRAEKRRVRAMQQAMDETTGKSTWRQVIDSRKVLIPPSAHS
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory