Comparing GFF4229 FitnessBrowser__WCS417:GFF4229 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 14 hits to proteins with known functional sites (download)
3wlxA Crystal structure of low-specificity l-threonine aldolase from escherichia coli
58% identity, 99% coverage: 3:331/334 of query aligns to 1:330/331 of 3wlxA
4rjyA Crystal structure of e. Coli l-threonine aldolase in complex with a non-covalently uncleaved bound l-serine substrate (see paper)
57% identity, 99% coverage: 3:331/334 of query aligns to 1:330/332 of 4rjyA
4lnlA Structure of escherichia coli threonine aldolase in complex with allo- thr (see paper)
57% identity, 99% coverage: 3:331/334 of query aligns to 1:330/332 of 4lnlA
4lnjA Structure of escherichia coli threonine aldolase in unliganded form (see paper)
57% identity, 99% coverage: 3:331/334 of query aligns to 1:330/332 of 4lnjA
4lnmA Structure of escherichia coli threonine aldolase in complex with serine (see paper)
57% identity, 99% coverage: 3:331/334 of query aligns to 1:330/331 of 4lnmA
O07051 L-allo-threonine aldolase; L-allo-TA; L-allo-threonine acetaldehyde-lyase; EC 4.1.2.49 from Aeromonas jandaei (see paper)
59% identity, 99% coverage: 1:331/334 of query aligns to 1:335/338 of O07051
3wgcB Aeromonas jandaei l-allo-threonine aldolase h128y/s292r double mutant (see paper)
59% identity, 98% coverage: 4:331/334 of query aligns to 3:332/333 of 3wgcB
3wgbD Crystal structure of aeromonas jandaei l-allo-threonine aldolase (see paper)
59% identity, 98% coverage: 4:331/334 of query aligns to 2:323/324 of 3wgbD
1lw5B X-ray structure of l-threonine aldolase (low-specificity) in complex with glycine (see paper)
47% identity, 99% coverage: 3:334/334 of query aligns to 1:341/343 of 1lw5B
1lw4B X-ray structure of l-threonine aldolase (low-specificity) in complex with l-allo-threonine (see paper)
47% identity, 99% coverage: 3:334/334 of query aligns to 1:341/343 of 1lw4B
1jg8D Crystal structure of threonine aldolase (low-specificity)
47% identity, 99% coverage: 3:334/334 of query aligns to 2:342/344 of 1jg8D
Q8RXU4 Low-specificity L-threonine aldolase 1; Threonine aldolase 1; EC 4.1.2.48 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
43% identity, 98% coverage: 1:328/334 of query aligns to 3:345/358 of Q8RXU4
5vyeB Crystal structure of l-threonine aldolase from pseudomonas putida
26% identity, 95% coverage: 8:325/334 of query aligns to 8:335/344 of 5vyeB
O50584 Low specificity L-threonine aldolase; Low specificity L-TA; EC 4.1.2.48 from Pseudomonas sp. (strain NCIMB 10558) (see paper)
26% identity, 95% coverage: 8:325/334 of query aligns to 10:337/346 of O50584
>GFF4229 FitnessBrowser__WCS417:GFF4229
MSVIDLRSDTVTQPTPGMRDAMATAVSGDDVYGEDPSVNRLEAELAKRLGFAAALFVPTG
TMSNLLALMAHCERGEEYIVGQQAHTYKYEGGGAAVLGSIQPQPLEVQADGSLDLDQVLA
AIKPDDFHFARTRLLALENTMQGKVLPLDYLAKARAFTREHDLALHLDGARLYNAAVKLG
VDAREIAQHFDSVSVCLSKGLGAPIGSVLCGSTALIAKARRLRKMVGGGMRQAGSLAAAG
LYALDHQVQRLAEDHANAHWLGDALRQAGYEVEPVQTNMVYVQIGDQAQALKAFAAERGI
TLSAAPRLRMVTHLDVSRAQIERVAQTFVEFSRK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory