Comparing GFF4535 PS417_23210 serine acetyltransferase to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4h7oA Crystal structure of serine acetyltransferase from vibrio cholerae o1 biovar el tor n16961
47% identity, 63% coverage: 8:172/260 of query aligns to 80:244/258 of 4h7oA
Sites not aligning to the query:
1t3dA Crystal structure of serine acetyltransferase from e.Coli at 2.2a (see paper)
46% identity, 63% coverage: 8:172/260 of query aligns to 84:248/262 of 1t3dA
1ssqD Serine acetyltransferase- complex with cysteine (see paper)
47% identity, 62% coverage: 8:168/260 of query aligns to 80:240/257 of 1ssqD
4hzdA Crystal structure of serine acetyltransferase in complex with coenzyme a from brucella abortus strain s19 (see paper)
44% identity, 63% coverage: 5:168/260 of query aligns to 81:244/250 of 4hzdA
7bw9A Crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica
44% identity, 61% coverage: 3:160/260 of query aligns to 101:258/280 of 7bw9A
6wyeA Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) (see paper)
40% identity, 63% coverage: 8:170/260 of query aligns to 85:247/261 of 6wyeA
7ra4A Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine (see paper)
42% identity, 61% coverage: 8:166/260 of query aligns to 83:241/243 of 7ra4A
3gvdI Crystal structure of serine acetyltransferase cyse from yersinia pestis
45% identity, 63% coverage: 8:172/260 of query aligns to 87:251/272 of 3gvdI
1sstA Serine acetyltransferase- complex with coa (see paper)
45% identity, 62% coverage: 8:168/260 of query aligns to 80:233/233 of 1sstA
4n69A Soybean serine acetyltransferase complexed with serine (see paper)
42% identity, 62% coverage: 8:168/260 of query aligns to 83:243/243 of 4n69A
3p47A Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine (see paper)
40% identity, 60% coverage: 5:160/260 of query aligns to 105:268/270 of 3p47A
3q1xA Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-serine (see paper)
40% identity, 60% coverage: 5:160/260 of query aligns to 103:266/267 of 3q1xA
4n6bA Soybean serine acetyltransferase complexed with coa (see paper)
38% identity, 63% coverage: 5:168/260 of query aligns to 58:233/233 of 4n6bA
1krvA Galactoside acetyltransferase in complex with coa and pnp-beta-gal (see paper)
30% identity, 37% coverage: 74:168/260 of query aligns to 77:181/201 of 1krvA
Sites not aligning to the query:
1kruA Galactoside acetyltransferase in complex with iptg and coenzyme a (see paper)
30% identity, 37% coverage: 74:168/260 of query aligns to 77:181/201 of 1kruA
Sites not aligning to the query:
P07464 Galactoside O-acetyltransferase; GAT; Acetyl-CoA:galactoside 6-O-acetyltransferase; Thiogalactoside acetyltransferase; Thiogalactoside transacetylase; EC 2.3.1.18 from Escherichia coli (strain K12) (see 3 papers)
30% identity, 37% coverage: 74:168/260 of query aligns to 78:182/203 of P07464
Sites not aligning to the query:
1krrA Galactoside acetyltransferase in complex with acetyl-coenzyme a (see paper)
30% identity, 37% coverage: 74:168/260 of query aligns to 77:181/200 of 1krrA
Sites not aligning to the query:
4mzuF Crystal structure of fdtd, a bifunctional ketoisomerase/n- acetyltransferase from shewanella denitrificans (see paper)
36% identity, 32% coverage: 85:167/260 of query aligns to 58:140/294 of 4mzuF
Sites not aligning to the query:
4isxA The crystal structure of maltose o-acetyltransferase from clostridium difficile 630 in complex with acetyl-coa
32% identity, 43% coverage: 61:172/260 of query aligns to 68:185/186 of 4isxA
G3XD01 UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase; UDP-D-GlcNAc3NA N-acetyltransferase; UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D-glucuronic acid 3-N-acetyltransferase; EC 2.3.1.201 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
30% identity, 43% coverage: 58:168/260 of query aligns to 25:152/191 of G3XD01
>GFF4535 PS417_23210 serine acetyltransferase
MFERLREDIQSVFHRDPAARNAFEVLTCYPGMHAIWIHRLSGALWGMGWKWLARLVSNFG
RWLTGIEIHPGAKVGRRFFIDHGMGIVIGETAEIGDDVTLYQGVTLGGTSWNKGKRHPTL
GDGVVVGAGAKVLGPFTVGAGAKVGSNAVVTKAVPPGATVVGIPGRIIVKPEVGDEQEAK
RKAMAEKIGFDAYGVSEDMPDPVARAIGQLLDHLQAVDGKLDGMCGALKELGSSYCAKDL
PELREEDFAEIKSETATKAG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory