SitesBLAST
Comparing GFF4893 FitnessBrowser__WCS417:GFF4893 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
5u2kA Crystal structure of galactoside o-acetyltransferase complex with coa (h3 space group)
39% identity, 65% coverage: 58:180/188 of query aligns to 75:186/190 of 5u2kA
- binding coenzyme a: M90 (≠ G73), Y110 (= Y100), A112 (≠ S104), H114 (= H106), L146 (≠ V140), P147 (≠ G141), V162 (= V156), T164 (= T158), K165 (≠ R159), N176 (≠ A170), P177 (= P171)
G3XD01 UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase; UDP-D-GlcNAc3NA N-acetyltransferase; UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D-glucuronic acid 3-N-acetyltransferase; EC 2.3.1.201 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
34% identity, 84% coverage: 27:184/188 of query aligns to 21:161/191 of G3XD01
- K136 (≠ R159) mutation to A: Reduction in catalytic activity.; mutation to R: No effect on catalytic activity.
3igjC Crystal structure of maltose o-acetyltransferase complexed with acetyl coenzyme a from bacillus anthracis
33% identity, 73% coverage: 43:180/188 of query aligns to 57:188/188 of 3igjC
- binding acetyl coenzyme *a: F84 (vs. gap), N86 (= N67), L92 (≠ G73), F105 (≠ I86), A106 (≠ G87), Y112 (≠ V93), A114 (≠ H95), H116 (= H97), W140 (= W132), G142 (= G134), G143 (≠ S135), N148 (≠ V140), P149 (≠ G141), A160 (≠ G152), S161 (≠ A153), V164 (= V156), T166 (= T158), G176 (≠ V168), G177 (= G169), N178 (≠ A170), P179 (= P171), I183 (= I175), K184 (= K176)
4isxA The crystal structure of maltose o-acetyltransferase from clostridium difficile 630 in complex with acetyl-coa
35% identity, 64% coverage: 61:180/188 of query aligns to 78:186/186 of 4isxA
- binding acetyl coenzyme *a: F82 (≠ K65), N84 (= N67), L103 (≠ I86), A104 (≠ G87), W138 (= W132), G140 (= G134), G141 (≠ S135), G158 (= G152), A159 (= A153), V174 (= V168), G175 (= G169), I181 (= I175), K182 (= K176)
P07464 Galactoside O-acetyltransferase; GAT; Acetyl-CoA:galactoside 6-O-acetyltransferase; Thiogalactoside acetyltransferase; Thiogalactoside transacetylase; EC 2.3.1.18 from Escherichia coli (strain K12) (see 3 papers)
32% identity, 71% coverage: 52:185/188 of query aligns to 64:192/203 of P07464
- S71 (≠ T59) binding
- N85 (≠ H71) binding in other chain; binding in other chain
- D93 (vs. gap) binding
- H115 (= H97) mutation to A: Results in an 1800-fold decrease in catalytic activity.
- S142 (= S135) binding in other chain
- A160 (= A153) binding in other chain
- TK 165:166 (≠ TR 158:159) binding
- R180 (≠ K173) binding
- R183 (≠ K176) binding in other chain
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed; Partial
- 17 binding
1krvA Galactoside acetyltransferase in complex with coa and pnp-beta-gal (see paper)
32% identity, 71% coverage: 52:185/188 of query aligns to 63:191/201 of 1krvA
- binding 4-nitrophenyl beta-D-galactopyranoside: S70 (≠ T59), Y82 (= Y69), N84 (≠ H71), V90 (vs. gap), D92 (vs. gap), L102 (= L85), T112 (≠ H95), H114 (= H97), N123 (≠ H106), G124 (≠ P107), M126 (≠ L120)
- binding coenzyme a: A104 (≠ G87), S110 (≠ V93), T112 (≠ H95), H114 (= H97), V116 (= V99), W138 (= W132), G140 (= G134), S141 (= S135), N146 (≠ V140), G158 (= G152), A159 (= A153), T164 (= T158), K165 (≠ R159), V172 (≠ L166), A174 (≠ V168), P177 (= P171), R179 (≠ K173), R182 (≠ K176)
Sites not aligning to the query:
1kruA Galactoside acetyltransferase in complex with iptg and coenzyme a (see paper)
32% identity, 71% coverage: 52:185/188 of query aligns to 63:191/201 of 1kruA
- binding coenzyme a: A104 (≠ G87), P105 (≠ S88), S110 (≠ V93), T112 (≠ H95), H114 (= H97), W138 (= W132), G140 (= G134), S141 (= S135), N146 (≠ V140), G158 (= G152), A159 (= A153), K165 (≠ R159), A174 (≠ V168), V176 (≠ A170), P177 (= P171), R182 (≠ K176)
- binding 1-methylethyl 1-thio-beta-D-galactopyranoside: S70 (≠ T59), Y82 (= Y69), Y82 (= Y69), N84 (≠ H71), V90 (vs. gap), D92 (vs. gap), L102 (= L85), T112 (≠ H95), H114 (= H97), M126 (≠ L120)
Sites not aligning to the query:
1krrA Galactoside acetyltransferase in complex with acetyl-coenzyme a (see paper)
32% identity, 71% coverage: 52:185/188 of query aligns to 63:191/200 of 1krrA
- binding acetyl coenzyme *a: N84 (≠ H71), I103 (= I86), A104 (≠ G87), P105 (≠ S88), S110 (≠ V93), T112 (≠ H95), H114 (= H97), V116 (= V99), W138 (= W132), G140 (= G134), S141 (= S135), N146 (≠ V140), G158 (= G152), A159 (= A153), I162 (≠ V156), T164 (= T158), V172 (≠ L166), A174 (≠ V168), G175 (= G169), V176 (≠ A170), P177 (= P171), R182 (≠ K176)
3nz2C Crystal structure of hexapeptide-repeat containing-acetyltransferase vca0836 complexed with acetyl co enzyme a from vibrio cholerae o1 biovar eltor
31% identity, 64% coverage: 60:180/188 of query aligns to 68:183/183 of 3nz2C
- binding acetyl coenzyme *a: F79 (≠ H71), N81 (≠ G73), L87 (vs. gap), L99 (= L85), I100 (= I86), G101 (= G87), Y107 (≠ V93), A109 (≠ H95), H111 (= H97), L113 (≠ V99), W135 (= W132), G137 (= G134), G138 (≠ S135), N143 (≠ V140), A155 (≠ G152), A156 (= A153), N161 (≠ T158), L169 (= L166), G171 (≠ V168), G172 (= G169), T173 (≠ A170), P174 (= P171), L178 (≠ I175), R179 (≠ K176)
- binding magnesium ion: N157 (= N154), T173 (≠ A170)
3ectA Crystal structure of the hexapeptide-repeat containing- acetyltransferase vca0836 from vibrio cholerae
31% identity, 64% coverage: 60:180/188 of query aligns to 61:176/176 of 3ectA
3nz2J Crystal structure of hexapeptide-repeat containing-acetyltransferase vca0836 complexed with acetyl co enzyme a from vibrio cholerae o1 biovar eltor
32% identity, 63% coverage: 60:178/188 of query aligns to 71:184/185 of 3nz2J
- binding acetyl coenzyme *a: N84 (≠ G73), L90 (vs. gap), I103 (= I86), G104 (= G87), Y110 (≠ V93), A112 (≠ H95), H114 (= H97), L116 (≠ V99), W138 (= W132), G140 (= G134), G141 (≠ S135), N146 (≠ V140), A158 (≠ G152), A159 (= A153), N164 (≠ T158), L172 (= L166), G174 (≠ V168), G175 (= G169), T176 (≠ A170), P177 (= P171), L181 (≠ I175), R182 (≠ K176)
A1ADJ6 Polysialic acid O-acetyltransferase; Capsule O-acetyl transferase; EC 2.3.1.136 from Escherichia coli O1:K1 / APEC (see paper)
34% identity, 59% coverage: 66:176/188 of query aligns to 184:278/307 of A1ADJ6
- H210 (= H106) mutation to A: Loss of activity.
- W234 (= W132) mutation to A: Loss of activity.
3dhoA Structure of streptogramin acetyltransferase in complex with an inhibitor
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/203 of 3dhoA
- binding 6-bromo-N'-[(1Z)-(3,5-dichloro-2-hydroxyphenyl)methylidene]-2-methylquinoline-4-carbohydrazide: M84 (≠ R101), K111 (≠ G122), I139 (≠ V150), A141 (≠ G152), V147 (≠ T158), L155 (= L166), A156 (= A167), G157 (≠ V168), P160 (= P171), I164 (= I175), K165 (= K176)
1kk4A Crystal structure of vat(d) in complex with acetyl-coa (see paper)
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/205 of 1kk4A
- binding acetyl coenzyme *a: I69 (= I86), G70 (= G87), A80 (≠ H97), H82 (≠ V99), M84 (≠ R101), K111 (≠ G122), W121 (= W132), G123 (= G134), K124 (≠ S135), M129 (≠ V140), I139 (≠ V150), A141 (≠ G152), A142 (= A153), V147 (≠ T158), K148 (≠ R159), L155 (= L166), G157 (≠ V168), G158 (= G169), P160 (= P171), I164 (= I175)
Sites not aligning to the query:
P50870 Streptogramin A acetyltransferase; Virginiamycin acetyltransferase D; Vat(D); EC 2.3.1.- from Enterococcus faecium (Streptococcus faecium) (see paper)
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/209 of P50870
- H82 (≠ V99) mutation to A: 105-fold decrease in activity.
1mrlA Crystal structure of streptogramin a acetyltransferase with dalfopristin (see paper)
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/204 of 1mrlA
- binding 5-(2-diethylamino-ethanesulfonyl)-21-hydroxy-10-isopropyl-11,19-dimethyl-9,26-dioxa-3,15,28-triaza-tricyclo[23.2.1.00,255]octacosa-1(27),12,17,19,25(28)-pentaene-2,8,14,23-tetraone: G79 (≠ E96), N81 (≠ G98), H82 (≠ V99), L93 (= L110), M102 (vs. gap), P103 (= P114), L108 (= L119)
Sites not aligning to the query:
- binding 5-(2-diethylamino-ethanesulfonyl)-21-hydroxy-10-isopropyl-11,19-dimethyl-9,26-dioxa-3,15,28-triaza-tricyclo[23.2.1.00,255]octacosa-1(27),12,17,19,25(28)-pentaene-2,8,14,23-tetraone: 14, 17, 37, 39, 54, 56
1khrA Crystal structure of vat(d) in complex with virginiamycin and coenzyme a (see paper)
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/206 of 1khrA
- binding coenzyme a: A80 (≠ H97), H82 (≠ V99), M84 (≠ R101), W121 (= W132), G123 (= G134), K124 (≠ S135), M129 (≠ V140), A141 (≠ G152), A142 (= A153), V147 (≠ T158), L155 (= L166), G157 (≠ V168), G158 (= G169), P160 (= P171), I164 (= I175)
- binding virginiamycin m1: G79 (≠ E96), A80 (≠ H97), N81 (≠ G98), H82 (≠ V99), N92 (≠ S109), L93 (= L110), M102 (vs. gap), P103 (= P114)
Sites not aligning to the query:
6pxaE The crystal structure of chloramphenicol acetyltransferase-like protein from vibrio fischeri es114 in complex with taurocholic acid
32% identity, 63% coverage: 71:188/188 of query aligns to 64:185/221 of 6pxaE
Sites not aligning to the query:
5ux9A The crystal structure of chloramphenicol acetyltransferase from vibrio fischeri es114
32% identity, 63% coverage: 71:188/188 of query aligns to 59:180/215 of 5ux9A
Sites not aligning to the query:
6x3jA Crystal structure of streptogramin a acetyltransferase vata from staphylococcus aureus in complex with streptogramin analog f0224 (46) (see paper)
32% identity, 60% coverage: 76:188/188 of query aligns to 58:178/206 of 6x3jA
- binding (2R)-2-[(3S,4R,5E,10E,12E,14S,16R,26aR)-16-fluoro-14-hydroxy-4,12-dimethyl-1,7,22-trioxo-4,7,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosin-3-yl]propyl isoquinolin-3-ylcarbamate: G78 (≠ E96), A79 (≠ H97), H81 (≠ V99), H91 (≠ S109), L92 (= L110), M101 (≠ T113), P102 (= P114), L107 (= L119)
- binding thioacetic acid s-{2-[3-(2-hydroxy-3,3-dimethyl-4-phosphonooxy-butyrylamino)-propionylamino]-ethyl} ester: G69 (= G87), P70 (≠ S88), A79 (≠ H97), N80 (≠ G98), H81 (≠ V99), M83 (≠ R101), W120 (= W132), G122 (= G134), A140 (≠ G152), A141 (= A153), I154 (≠ L166)
Sites not aligning to the query:
- binding (2R)-2-[(3S,4R,5E,10E,12E,14S,16R,26aR)-16-fluoro-14-hydroxy-4,12-dimethyl-1,7,22-trioxo-4,7,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosin-3-yl]propyl isoquinolin-3-ylcarbamate: 36, 38, 51, 53, 55
- binding thioacetic acid s-{2-[3-(2-hydroxy-3,3-dimethyl-4-phosphonooxy-butyrylamino)-propionylamino]-ethyl} ester: 51
Query Sequence
>GFF4893 FitnessBrowser__WCS417:GFF4893
MWIRLAFFSVLSKLLYGMNVRVIKGFARVINKGHLQFGSRFTAGVDLRIEVLEDSACVTF
GQNVKINDYCHIGAMSRVVVGDDCLIGSRVTIVDHEHGVYRKPSDHPASLPWTPPDERLL
QGKPIIIEKNVWIGSGAIIVGGVTIGEGSVIGANAVVTRDISRYSLAVGAPAKVIKTFDE
GGKQWLCV
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory