Comparing GFF4893 FitnessBrowser__WCS417:GFF4893 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
5u2kA Crystal structure of galactoside o-acetyltransferase complex with coa (h3 space group)
39% identity, 65% coverage: 58:180/188 of query aligns to 75:186/190 of 5u2kA
G3XD01 UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase; UDP-D-GlcNAc3NA N-acetyltransferase; UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D-glucuronic acid 3-N-acetyltransferase; EC 2.3.1.201 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
34% identity, 84% coverage: 27:184/188 of query aligns to 21:161/191 of G3XD01
3igjC Crystal structure of maltose o-acetyltransferase complexed with acetyl coenzyme a from bacillus anthracis
33% identity, 73% coverage: 43:180/188 of query aligns to 57:188/188 of 3igjC
4isxA The crystal structure of maltose o-acetyltransferase from clostridium difficile 630 in complex with acetyl-coa
35% identity, 64% coverage: 61:180/188 of query aligns to 78:186/186 of 4isxA
P07464 Galactoside O-acetyltransferase; GAT; Acetyl-CoA:galactoside 6-O-acetyltransferase; Thiogalactoside acetyltransferase; Thiogalactoside transacetylase; EC 2.3.1.18 from Escherichia coli (strain K12) (see 3 papers)
32% identity, 71% coverage: 52:185/188 of query aligns to 64:192/203 of P07464
Sites not aligning to the query:
1krvA Galactoside acetyltransferase in complex with coa and pnp-beta-gal (see paper)
32% identity, 71% coverage: 52:185/188 of query aligns to 63:191/201 of 1krvA
Sites not aligning to the query:
1kruA Galactoside acetyltransferase in complex with iptg and coenzyme a (see paper)
32% identity, 71% coverage: 52:185/188 of query aligns to 63:191/201 of 1kruA
Sites not aligning to the query:
1krrA Galactoside acetyltransferase in complex with acetyl-coenzyme a (see paper)
32% identity, 71% coverage: 52:185/188 of query aligns to 63:191/200 of 1krrA
3nz2C Crystal structure of hexapeptide-repeat containing-acetyltransferase vca0836 complexed with acetyl co enzyme a from vibrio cholerae o1 biovar eltor
31% identity, 64% coverage: 60:180/188 of query aligns to 68:183/183 of 3nz2C
3ectA Crystal structure of the hexapeptide-repeat containing- acetyltransferase vca0836 from vibrio cholerae
31% identity, 64% coverage: 60:180/188 of query aligns to 61:176/176 of 3ectA
3nz2J Crystal structure of hexapeptide-repeat containing-acetyltransferase vca0836 complexed with acetyl co enzyme a from vibrio cholerae o1 biovar eltor
32% identity, 63% coverage: 60:178/188 of query aligns to 71:184/185 of 3nz2J
A1ADJ6 Polysialic acid O-acetyltransferase; Capsule O-acetyl transferase; EC 2.3.1.136 from Escherichia coli O1:K1 / APEC (see paper)
34% identity, 59% coverage: 66:176/188 of query aligns to 184:278/307 of A1ADJ6
8j40A Crystal structure of catb8 in complex with chloramphenicol (see paper)
33% identity, 54% coverage: 75:176/188 of query aligns to 53:161/209 of 8j40A
Sites not aligning to the query:
3dhoA Structure of streptogramin acetyltransferase in complex with an inhibitor
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/203 of 3dhoA
1kk4A Crystal structure of vat(d) in complex with acetyl-coa (see paper)
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/205 of 1kk4A
P50870 Streptogramin A acetyltransferase; Virginiamycin acetyltransferase D; Vat(D); EC 2.3.1.- from Enterococcus faecium (Streptococcus faecium) (see paper)
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/209 of P50870
1mrlA Crystal structure of streptogramin a acetyltransferase with dalfopristin (see paper)
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/204 of 1mrlA
Sites not aligning to the query:
1khrA Crystal structure of vat(d) in complex with virginiamycin and coenzyme a (see paper)
37% identity, 56% coverage: 76:180/188 of query aligns to 59:170/206 of 1khrA
Sites not aligning to the query:
6pxaE The crystal structure of chloramphenicol acetyltransferase-like protein from vibrio fischeri es114 in complex with taurocholic acid
32% identity, 63% coverage: 71:188/188 of query aligns to 64:185/221 of 6pxaE
Sites not aligning to the query:
5ux9A The crystal structure of chloramphenicol acetyltransferase from vibrio fischeri es114
32% identity, 63% coverage: 71:188/188 of query aligns to 59:180/215 of 5ux9A
Sites not aligning to the query:
>GFF4893 FitnessBrowser__WCS417:GFF4893
MWIRLAFFSVLSKLLYGMNVRVIKGFARVINKGHLQFGSRFTAGVDLRIEVLEDSACVTF
GQNVKINDYCHIGAMSRVVVGDDCLIGSRVTIVDHEHGVYRKPSDHPASLPWTPPDERLL
QGKPIIIEKNVWIGSGAIIVGGVTIGEGSVIGANAVVTRDISRYSLAVGAPAKVIKTFDE
GGKQWLCV
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory