Comparing GFF5251 PS417_26890 dihydroxy-acid dehydratase to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
39% identity, 98% coverage: 5:604/613 of query aligns to 20:573/575 of P9WKJ5
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
39% identity, 98% coverage: 5:604/613 of query aligns to 7:560/562 of 6ovtA
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
37% identity, 99% coverage: 4:607/613 of query aligns to 56:608/608 of Q9LIR4
8hs0A The mutant structure of dhad v178w
37% identity, 99% coverage: 4:607/613 of query aligns to 18:570/570 of 8hs0A
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
32% identity, 96% coverage: 13:603/613 of query aligns to 22:557/579 of B5ZZ34
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
31% identity, 96% coverage: 13:603/613 of query aligns to 19:554/576 of 5j85A
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
31% identity, 90% coverage: 19:567/613 of query aligns to 20:522/569 of 8epzA
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg
31% identity, 90% coverage: 19:567/613 of query aligns to 19:521/568 of 8ej0A
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
30% identity, 93% coverage: 2:571/613 of query aligns to 6:534/583 of Q1JUQ1
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
29% identity, 88% coverage: 26:567/613 of query aligns to 28:536/587 of 7m3kA
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see 2 papers)
30% identity, 93% coverage: 34:604/613 of query aligns to 49:576/595 of Q9A9Z2
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
30% identity, 93% coverage: 34:604/613 of query aligns to 43:570/589 of 5oynA
>GFF5251 PS417_26890 dihydroxy-acid dehydratase
MPDYRSKTSTHGRNMAGARALWRATGMKDDDFKKPIIAIANSFTQFVPGHVHLKDLGQLV
AREIERAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCADAIVCIS
NCDKITPGMLMAALRLNIPVIFVSGGPMEAGKTKLASHGLDLVDAMVIAADSSASDEKVA
EYERSACPTCGSCSGMFTANSMNCLVEALGLALPGNGSTLATHSDREQLFLQAGRTIVEL
CKRYYGENDESVLPRNIANFKAFENAMTLDIAMGGSTNTILHLLAAAQEAEIEFDLRDID
RLSRHVPQLCKVAPNIQKYHMEDVHRAGGIFSILGSLARGGLLHTDLPTVHSKSIAEGIA
KWDITQTDDEAVHTFFKAGPAGIPTQTAFSQSTRWDTLDDDRENGCIRSVEHAYSKEGGL
AVLYGNIALDGCVVKTAGVDESIHVFEGNAKIFESQDSAVRGILADEVKAGDIVIIRYEG
PKGGPGMQEMLYPTSYLKSKGLGKACALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVQ
DGDKVLIDIPNRSINLLISDEELAARRVEQDKKGWKPVEKRPRKVTTALKAYALLATSAD
KGAVRNKAMLDGL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory