Comparing GFF774 PGA1_c07880 alpha-glucoside transport system permease protein AglG to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
31% identity, 61% coverage: 150:382/382 of query aligns to 55:280/281 of P94530
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
33% identity, 49% coverage: 196:382/382 of query aligns to 106:295/296 of P68183
>GFF774 PGA1_c07880 alpha-glucoside transport system permease protein AglG
MTVIAGEKPALIWALRLSVVLLVGLWLFPTLGLLVSSFRTSDQIATSGWWRAMFPSEQNL
TLRTNPPSAQVQEGDRYVIEGRLFAEGTSSEISAWGTSARDPAAYEPGISAELRRGGTLT
VTEDGAYRLESTEEISGKRGPRVFVTATVPPEFTLENYETVLISGNSTDNMAKAFFNTLT
VTIPATIIPILVAAFAAYALAWMEFPGRALLVAAIVGLLVVPLQLALIPLLKFHNEIGIG
KGYIGVWMAHTGFGLPLAIYLLRNYMVGIPRDIIENARVDGATDFLIFVRIILPLSFPAL
ASFAIFQFLWTWNDLLVAMVFLIDATGETTVMTKQIVELLGTRGGNWEILATSAFVSIAV
PLAVFFAMQKYLVRGLLAGSVK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory