SitesBLAST
Comparing GFF854 FitnessBrowser__Marino:GFF854 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3cv7A Crystal structure of porcine aldehyde reductase ternary complex (see paper)
33% identity, 96% coverage: 6:262/269 of query aligns to 14:301/322 of 3cv7A
- active site: D45 (= D37), Y50 (= Y42), K80 (= K67), H113 (= H100)
- binding 3,5-dichloro-2-hydroxybenzoic acid: W22 (≠ F14), Y50 (= Y42), W82 (= W69), H113 (= H100)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G20 (= G12), T21 (= T13), W22 (≠ F14), Y50 (= Y42), H113 (= H100), Q184 (= Q155), Y210 (= Y181), S211 (≠ M182), P212 (= P183), L213 (= L184), S215 (≠ V186), A246 (= A207), I261 (= I222), P262 (= P223), K263 (≠ S224), S264 (= S225), V265 (≠ T226), T266 (≠ R227), R269 (≠ H230), Q272 (≠ A233), N273 (= N234)
Sites not aligning to the query:
3h4gA Structure of aldehyde reductase holoenzyme in complex with potent aldose reductase inhibitor fidarestat: implications for inhibitor binding and selectivity (see paper)
33% identity, 96% coverage: 6:262/269 of query aligns to 14:301/320 of 3h4gA
- active site: D45 (= D37), Y50 (= Y42), K80 (= K67), H113 (= H100)
- binding (2s,4s)-2-aminoformyl-6-fluoro-spiro[chroman-4,4'-imidazolidine]-2',5'-dione: W22 (≠ F14), Y50 (= Y42), H113 (= H100), W114 (= W101), W220 (vs. gap), I299 (≠ A260), V300 (≠ N261), P301 (= P262)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G20 (= G12), T21 (= T13), W22 (≠ F14), D45 (= D37), Y50 (= Y42), H113 (= H100), S162 (= S132), N163 (= N133), Q184 (= Q155), Y210 (= Y181), S211 (≠ M182), P212 (= P183), L213 (= L184), S215 (≠ V186), D217 (≠ K188), A246 (= A207), I261 (= I222), P262 (= P223), K263 (≠ S224), S264 (= S225), V265 (≠ T226), T266 (≠ R227), R269 (≠ H230), Q272 (≠ A233), N273 (= N234)
3fx4A Porcine aldehyde reductase in ternary complex with inhibitor (see paper)
33% identity, 96% coverage: 6:262/269 of query aligns to 14:301/325 of 3fx4A
- active site: D45 (= D37), Y50 (= Y42), K80 (= K67), H113 (= H100)
- binding [(5Z)-5-{[3-(carboxymethoxy)-4-methoxyphenyl]methylidene}-2,4-dioxo-1,3-thiazolidin-3-yl]acetic acid: W22 (≠ F14), Y50 (= Y42), H113 (= H100), R218 (vs. gap), A219 (vs. gap), F298 (≠ I259), I299 (≠ A260), V300 (≠ N261)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G20 (= G12), T21 (= T13), W22 (≠ F14), D45 (= D37), Y50 (= Y42), H113 (= H100), Q184 (= Q155), Y210 (= Y181), S211 (≠ M182), P212 (= P183), L213 (= L184), S215 (≠ V186), A246 (= A207), I261 (= I222), P262 (= P223), K263 (≠ S224), S264 (= S225), V265 (≠ T226), T266 (≠ R227), R269 (≠ H230), Q272 (≠ A233), N273 (= N234)
P50578 Aldo-keto reductase family 1 member A1; Alcohol dehydrogenase [NADP(+)]; Aldehyde reductase; Glucuronate reductase; Glucuronolactone reductase; S-nitroso-CoA reductase; ScorR; EC 1.1.1.2; EC 1.1.1.372; EC 1.1.1.54; EC 1.1.1.19; EC 1.1.1.20; EC 1.6.-.- from Sus scrofa (Pig) (see 2 papers)
33% identity, 96% coverage: 6:262/269 of query aligns to 14:301/325 of P50578
- T21 (= T13) binding NADP(+)
- W22 (≠ F14) binding NADP(+)
- D45 (= D37) binding NADP(+)
- Y50 (= Y42) active site, Proton donor; mutation to F: Abolished aldo-keto reductase activity.
- S162 (= S132) binding NADP(+)
- N163 (= N133) binding NADP(+)
- S211 (≠ M182) binding NADP(+)
- L213 (= L184) binding NADP(+)
- S215 (≠ V186) binding NADP(+)
- S216 (≠ G187) binding NADP(+)
- K263 (≠ S224) binding NADP(+)
- S264 (= S225) binding NADP(+)
- V265 (≠ T226) binding NADP(+)
- T266 (≠ R227) binding NADP(+)
- R269 (≠ H230) binding NADP(+)
- Q272 (≠ A233) binding NADP(+)
- N273 (= N234) binding NADP(+)
4gieA Crystal structure of prostaglandin f synthase from trypanosoma cruzi bound to NADP (see paper)
36% identity, 97% coverage: 6:266/269 of query aligns to 23:285/288 of 4gieA
- active site: D55 (= D37), Y60 (= Y42), K85 (= K67), H118 (= H100)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G29 (= G12), W31 (≠ F14), D55 (= D37), Y60 (= Y42), H118 (= H100), W119 (= W101), N148 (= N133), Q169 (= Q155), W195 (≠ Y181), S196 (≠ M182), P197 (= P183), L198 (= L184), S200 (≠ V186), L207 (≠ M190), A224 (= A207), I239 (= I222), P240 (= P223), K241 (≠ S224), S242 (= S225), R247 (≠ H230), E250 (≠ A233), N251 (= N234)
4fziA Crystal structure of prostaglandin f synthase from trypanosoma cruzi (see paper)
36% identity, 97% coverage: 6:266/269 of query aligns to 12:274/277 of 4fziA
P51635 Aldo-keto reductase family 1 member A1; 3-DG-reducing enzyme; Alcohol dehydrogenase [NADP(+)]; Aldehyde reductase; Glucuronate reductase; Glucuronolactone reductase; S-nitroso-CoA reductase; ScorR; EC 1.1.1.2; EC 1.1.1.372; EC 1.1.1.54; EC 1.1.1.19; EC 1.1.1.20; EC 1.6.-.- from Rattus norvegicus (Rat) (see paper)
32% identity, 96% coverage: 6:262/269 of query aligns to 14:301/325 of P51635
- K23 (≠ R15) modified: carbohydrate, N-linked (Glc) (glycation) lysine
- K30 (≠ R22) Not glycated
- K34 (= K26) Not glycated
- K61 (≠ T53) Not glycated
- K68 (vs. gap) modified: carbohydrate, N-linked (Glc) (glycation) lysine
- K80 (= K67) Not glycated
- K85 (≠ Q72) modified: carbohydrate, N-linked (Glc) (glycation) lysine
- K97 (≠ D84) Not glycated
- K127 (vs. gap) Not glycated
- K134 (≠ P104) Not glycated
- K141 (= K111) modified: carbohydrate, N-linked (Glc) (glycation) lysine
- K145 (≠ G115) Not glycated
- K153 (≠ E123) modified: carbohydrate, N-linked (Glc) (glycation) lysine
- K157 (≠ E127) Not glycated
- K240 (≠ E201) Not glycated
- K257 (≠ G218) Not glycated
- K263 (≠ S224) Not glycated
- K287 (≠ R248) Not glycated
- K294 (≠ R255) Not glycated
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 2 modified: N-acetylthreonine
- 13 Not glycated
- 308 Not glycated
Q9JII6 Aldo-keto reductase family 1 member A1; Alcohol dehydrogenase [NADP(+)]; Aldehyde reductase; Glucuronate reductase; Glucuronolactone reductase; S-nitroso-CoA reductase; ScorR; EC 1.1.1.2; EC 1.1.1.372; EC 1.1.1.54; EC 1.1.1.19; EC 1.1.1.20; EC 1.6.-.- from Mus musculus (Mouse)
32% identity, 96% coverage: 6:262/269 of query aligns to 14:301/325 of Q9JII6
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 2 modified: N-acetylthreonine
P14550 Aldo-keto reductase family 1 member A1; Alcohol dehydrogenase [NADP(+)]; Aldehyde reductase; Glucuronate reductase; Glucuronolactone reductase; S-nitroso-CoA reductase; ScorR; EC 1.1.1.2; EC 1.1.1.372; EC 1.1.1.54; EC 1.1.1.19; EC 1.1.1.20; EC 1.6.-.- from Homo sapiens (Human) (see 5 papers)
32% identity, 96% coverage: 6:262/269 of query aligns to 14:301/325 of P14550
- Y50 (= Y42) active site, Proton donor; mutation to A: Abolished reductase activity.; mutation to F: Complete loss of enzymatic activity.; mutation to H: Complete loss of enzymatic activity.
- N52 (= N44) to S: reduced activity towards daunorubicin; dbSNP:rs2229540
- E55 (= E47) to D: reduced activity towards daunorubicin; dbSNP:rs6690497
- K80 (= K67) Lowers pKa of active site Tyr; mutation to M: Complete loss of enzymatic activity.
- H113 (= H100) mutation to Q: Strong decrease in enzymatic activity.
- K127 (vs. gap) mutation to A: Abolished S-nitroso-CoA reductase activity without affecting ability to reduce S-nitrosoglutathione, glyceraldehyde or glucuronate.
- I299 (≠ A260) mutation to A: No change in enzymatic activity.; mutation to C: No change in enzymatic activity.
- V300 (≠ N261) mutation to C: No change in enzymatic activity.
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 312 R→A: Abolished S-nitrosoglutathione reductase activity without affecting ability to reduce S-nitroso-CoA.
P14065 Glycerol 2-dehydrogenase (NADP(+)); Galactose-inducible crystallin-like protein 1; EC 1.1.1.156 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
35% identity, 98% coverage: 4:266/269 of query aligns to 18:307/312 of P14065
- Q29 (≠ R15) mutation to K: Decreases catalytic activity.
- Y56 (= Y42) mutation to L: Loss of catalytic activity.
- K264 (≠ S224) mutation to R: Decreases catalytic activity.
- N267 (≠ R227) mutation to Q: Decreases catalytic activity.
- R270 (≠ H230) mutation R->H,Y,K: Decreases catalytic activity.
A0QV10 Aldo-keto reductase MSMEG_2408/MSMEI_2347; EC 1.1.1.- from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
36% identity, 97% coverage: 4:263/269 of query aligns to 11:267/275 of A0QV10
- K262 (≠ E257) modified: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup)
3d3fA Crystal structure of yvgn and cofactor NADPH from bacillus subtilis (see paper)
37% identity, 96% coverage: 6:263/269 of query aligns to 16:271/275 of 3d3fA
- active site: D48 (= D37), Y53 (= Y42), K78 (= K67), H111 (= H100)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G22 (= G12), F24 (= F14), D48 (= D37), Y53 (= Y42), H111 (= H100), S140 (= S132), N141 (= N133), Q162 (= Q155), W188 (≠ Y181), S189 (≠ M182), P190 (= P183), L191 (= L184), Q193 (≠ V186), L197 (≠ M190), I229 (= I222), K231 (≠ S224), S232 (= S225), K234 (≠ R227), R237 (≠ H230), E240 (≠ A233), N241 (= N234)
4g5dA X-ray crystal structure of prostaglandin f synthase from leishmania major friedlin bound to NADPH (see paper)
35% identity, 97% coverage: 6:265/269 of query aligns to 16:281/283 of 4g5dA
- active site: D48 (= D37), Y53 (= Y42), K78 (= K67), H111 (= H100)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G22 (= G12), V23 (≠ T13), W24 (≠ F14), D48 (= D37), Y53 (= Y42), H111 (= H100), S148 (= S132), N149 (= N133), Q170 (= Q155), W196 (≠ Y181), S197 (≠ M182), P198 (= P183), L199 (= L184), Q201 (≠ V186), G202 (= G187), L205 (≠ M190), I237 (= I222), P238 (= P223), K239 (≠ S224), S240 (= S225), V241 (≠ T226), H242 (≠ R227), R245 (≠ H230), E248 (≠ A233), N249 (= N234)
Q9GV41 9,11-endoperoxide prostaglandin H2 reductase; Prostaglandin F2-alpha synthase; EC 1.1.1.- from Trypanosoma brucei brucei
34% identity, 96% coverage: 6:263/269 of query aligns to 15:268/276 of Q9GV41
1vbjA The crystal structure of prostaglandin f synthase from trypanosoma brucei
34% identity, 96% coverage: 6:263/269 of query aligns to 20:273/281 of 1vbjA
- active site: D52 (= D37), Y57 (= Y42), K82 (= K67), H115 (= H100)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G26 (= G12), M27 (≠ T13), W28 (≠ F14), D52 (= D37), Y57 (= Y42), H115 (= H100), N145 (= N133), Q166 (= Q155), W192 (≠ Y181), S193 (≠ M182), P194 (= P183), L195 (= L184), Q197 (≠ V186), G198 (= G187), V201 (≠ M190), A218 (= A207), I233 (= I222), K235 (≠ S224), S236 (= S225), G237 (≠ T226), R241 (≠ H230), E244 (≠ A233), N245 (= N234)
6kiyA Crystal structure of a thermostable aldo-keto reductase tm1743 in complex with inhibitor epalrestat (see paper)
36% identity, 92% coverage: 6:253/269 of query aligns to 14:274/275 of 6kiyA
- binding {5-[(2E)-2-methyl-3-phenylprop-2-en-1-ylidene]-4-oxo-2-thioxo-1,3-thiazolidin-3-yl}acetic acid: W22 (≠ F14), Y59 (= Y42), W87 (= W69), H118 (= H100), R204 (≠ V186)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G20 (= G12), T21 (= T13), W22 (≠ F14), Y59 (= Y42), H118 (= H100), N149 (= N133), Q170 (= Q155), Y199 (= Y181), S200 (≠ M182), P201 (= P183), L202 (= L184), R204 (≠ V186), T205 (≠ G187), Y227 (≠ A207), I243 (= I222), P244 (= P223), K245 (≠ S224), G247 (≠ T226), R248 (= R227), H251 (= H230), E254 (≠ A233), N255 (= N234)
6kikA Crystal structure of a thermostable aldo-keto reductase tm1743 in complex with inhibitor tolrestat (see paper)
36% identity, 92% coverage: 6:253/269 of query aligns to 14:274/275 of 6kikA
5danA Crystal structure of a novel aldo keto reductase tm1743 from thermotoga maritima in complex with NADP+
36% identity, 92% coverage: 6:253/269 of query aligns to 13:273/274 of 5danA
- active site: D53 (= D37), Y58 (= Y42), K84 (= K67), H117 (= H100)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G19 (= G12), T20 (= T13), W21 (≠ F14), D53 (= D37), Y58 (= Y42), H117 (= H100), Q169 (= Q155), Y198 (= Y181), S199 (≠ M182), P200 (= P183), L201 (= L184), R203 (≠ V186), Y226 (≠ A207), I242 (= I222), P243 (= P223), K244 (≠ S224), G246 (≠ T226), R247 (= R227), H250 (= H230), E253 (≠ A233), N254 (= N234)
3b3dA B.Subtilis ytbe (see paper)
35% identity, 96% coverage: 6:263/269 of query aligns to 17:276/280 of 3b3dA
3wbwA Crystal structure of gox0644 in complex with NADPH
34% identity, 94% coverage: 5:257/269 of query aligns to 13:259/271 of 3wbwA
- active site: D45 (= D37), Y50 (= Y42), K71 (= K67), H104 (= H100)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G20 (= G12), H104 (= H100), N136 (= N133), W183 (≠ Y181), R184 (≠ M182), P185 (= P183), L186 (= L184), L192 (≠ M190), A209 (= A207), K226 (≠ S224), S227 (= S225), V228 (≠ T226), R232 (≠ H230), E235 (≠ A233), N236 (= N234)
Query Sequence
>GFF854 FitnessBrowser__Marino:GFF854
MSFSALPKIGMGTFRLKGNDARDAVKSALSLGYRHIDTAQMYGNEAEVGDGITSSGIPRR
EIFLTTKIWHDQLHASDLINSLHDSLARLKTDHVDLALIHWPSPGDEVPMKEYLGALRDS
QREGLAEHIGISNFTCAQMDEAKAILGDTPIFTNQVEVHPFLANRKVVAHAQKLGITVTG
YMPLAVGKVMEDETLQRIAAERNLTPAQVAIAWVASRGVVPIPSSTRPGHQKANLEALEV
ELSEEEIRAIDELDRNERIANPDFAPSWD
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory