Comparing Ga0059261_0268 FitnessBrowser__Korea:Ga0059261_0268 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7zw9A Crystal structure of a gamma-carbonic anhydrase from the pathogenic bacterium burkholderia pseudomallei (see paper)
54% identity, 99% coverage: 1:173/174 of query aligns to 1:173/173 of 7zw9A
4n27A X-ray structure of brucella abortus rica (see paper)
53% identity, 98% coverage: 1:170/174 of query aligns to 1:172/175 of 4n27A
6iveA Molecular structure of a thermostable and a zinc ion binding gamma- class carbonic anhydrase (see paper)
47% identity, 97% coverage: 2:170/174 of query aligns to 1:163/168 of 6iveA
3r3rA Structure of the yrda ferripyochelin binding protein from salmonella enterica
44% identity, 95% coverage: 2:166/174 of query aligns to 7:178/184 of 3r3rA
2fkoA Structure of ph1591 from pyrococcus horikoshii ot3 (see paper)
42% identity, 99% coverage: 1:173/174 of query aligns to 1:173/173 of 2fkoA
1v3wA Structure of ferripyochelin binding protein from pyrococcus horikoshii ot3 (see paper)
42% identity, 99% coverage: 1:173/174 of query aligns to 1:173/173 of 1v3wA
3tioF Crystal structures of yrda from escherichia coli, a homologous protein of gamma-class carbonic anhydrase, show possible allosteric conformations (see paper)
42% identity, 95% coverage: 2:166/174 of query aligns to 2:173/177 of 3tioF
Q5KW03 Carbonic anhydrase; Gamma-carbonic anhydrase; Cag; EC 4.2.1.1 from Geobacillus kaustophilus (strain HTA426) (see paper)
39% identity, 95% coverage: 3:168/174 of query aligns to 2:167/182 of Q5KW03
3vnpA Crystal structure of hypothetical protein (gk2848) from geobacillus kaustophilus
39% identity, 95% coverage: 3:168/174 of query aligns to 3:168/171 of 3vnpA
8e73G2 qcr9 (see paper)
40% identity, 88% coverage: 9:161/174 of query aligns to 50:203/258 of 8e73G2
6sc4B Gamma-carbonic anhydrase from the haloarchaeon halobacterium sp. (see paper)
36% identity, 91% coverage: 3:161/174 of query aligns to 3:169/178 of 6sc4B
3ixcA Crystal structure of hexapeptide transferase family protein from anaplasma phagocytophilum
38% identity, 94% coverage: 3:166/174 of query aligns to 5:165/166 of 3ixcA
8bpxy Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (see paper)
37% identity, 88% coverage: 9:161/174 of query aligns to 51:209/265 of 8bpxy
Sites not aligning to the query:
8befy Cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci membrane core) (see paper)
37% identity, 88% coverage: 9:161/174 of query aligns to 51:209/265 of 8befy
Sites not aligning to the query:
7ar7y Cryo-em structure of arabidopsis thaliana complex-i (open conformation) (see paper)
37% identity, 88% coverage: 9:161/174 of query aligns to 50:208/268 of 7ar7y
Sites not aligning to the query:
7aqqy Cryo-em structure of arabidopsis thaliana complex-i (membrane core) (see paper)
37% identity, 88% coverage: 9:161/174 of query aligns to 50:208/268 of 7aqqy
7aqqz Cryo-em structure of arabidopsis thaliana complex-i (membrane core) (see paper)
37% identity, 88% coverage: 9:161/174 of query aligns to 50:208/233 of 7aqqz
Sites not aligning to the query:
7a23p Plant mitochondrial respiratory complex i (see paper)
37% identity, 88% coverage: 9:161/174 of query aligns to 46:204/224 of 7a23p
Sites not aligning to the query:
8gpmA Acinetobacter baumannii carbonic anhydrase
32% identity, 99% coverage: 1:173/174 of query aligns to 1:173/193 of 8gpmA
8gppA Acinetobacter baumannii carbonic anhydrase paay
32% identity, 98% coverage: 4:173/174 of query aligns to 3:172/189 of 8gppA
>Ga0059261_0268 FitnessBrowser__Korea:Ga0059261_0268
MALYAFEGKVPSIHPDAWVAPSADVIGDARLAEGASLWFGAVIRADNTPIIVGERSNVQE
GAMLHSDPGIPLTIGADCTVGHHAILHGCTLGNRVLVGMGAIVLNRAVIGDDCLIGAGAL
VTEGKEFPPGSLIVGSPARAVRELDATARTALLISAHSYADRQRRFRAGLTRID
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory