Comparing Ga0059261_0325 FitnessBrowser__Korea:Ga0059261_0325 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 9 hits to proteins with known functional sites (download)
6n2oC 2-oxoglutarate:ferredoxin oxidoreductase from magnetococcus marinus with 2-oxoglutarate, coenzyme a and succinyl-coa bound (see paper)
31% identity, 96% coverage: 22:624/625 of query aligns to 5:571/572 of 6n2oC
6n2oA 2-oxoglutarate:ferredoxin oxidoreductase from magnetococcus marinus with 2-oxoglutarate, coenzyme a and succinyl-coa bound (see paper)
31% identity, 96% coverage: 22:624/625 of query aligns to 5:571/572 of 6n2oA
6n2nA Crystal structure of 2-oxoglutarate:ferredoxin oxidoreductase from magnetococcus marinus (see paper)
31% identity, 96% coverage: 22:624/625 of query aligns to 5:571/572 of 6n2nA
5b47A 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai - pyruvate complex (see paper)
27% identity, 77% coverage: 146:624/625 of query aligns to 139:614/627 of 5b47A
5b46A 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai - ligand free form (see paper)
27% identity, 77% coverage: 146:624/625 of query aligns to 139:614/627 of 5b46A
P72578 2-oxoacid:ferredoxin oxidoreductase subunit alpha; OFOR; EC 1.2.7.11 from Sulfolobus sp. (see 2 papers)
31% identity, 58% coverage: 261:620/625 of query aligns to 238:610/632 of P72578
Q96XT2 2-oxoacid:ferredoxin oxidoreductase 2, subunit alpha; OFOR2; EC 1.2.7.11 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii) (see paper)
27% identity, 77% coverage: 146:624/625 of query aligns to 140:615/628 of Q96XT2
Q96Y66 2-oxoacid:ferredoxin oxidoreductase 1, subunit alpha; OFOR1; EC 1.2.7.11 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii) (see paper)
31% identity, 58% coverage: 261:620/625 of query aligns to 238:610/627 of Q96Y66
Sites not aligning to the query:
5b48A 2-oxoacid:ferredoxin oxidoreductase 1 from sulfolobus tokodai (see paper)
30% identity, 58% coverage: 261:620/625 of query aligns to 206:562/576 of 5b48A
>Ga0059261_0325 FitnessBrowser__Korea:Ga0059261_0325
MATAVHQVTPEEASANPPPEAVVVRFAGDSGDGMQLTGGQFTLSTALAGNDLATFPDFPA
EIRAPQGTLFGVSAFQINFGSAAIETAGDAPDVLVAMNPAALKTNVGDLKPGGLIIADEG
EFNKRNLDKAKYAENPLEDGSLAKWQLLKLNISQLTLDAVKPFGLGNKEALRCKNMWTLG
LALWMFDRERGPLIDWLKTKFAKAPELAEANIAALNAGHAYGETAELGAQGVGQLHVPAA
PVEPGLYRTVTGADSISLGLVAGAQLAGLKLFYGGYPITPASAILHHLARLKEFGVTTFQ
AEDEIAAVASALGASYAGSLGVTCSSGPGIALKTEAIGLAIMTELPLVIVNAQRGGPSTG
LPTKTEQSDLYQAVYGRNGDAPVPVIATRSAADCFDCAIEAVRIATQYMTPVMLLTDGYL
QNAAEPWKVPDMSGYKPFPVEFHTELPADGEKFLPYARDEKLKRPWVKPGTPGLLHRIGG
IEKALGTGNIDYAPDTHQAMTDIRKAKVEGIAVPDQEIEQGEAGGKLVVVGWGSTYGPIT
QAVRRARRKGLDVSHIHIRHIWPMPKNLGALLKGYEHILVPEMNTGQLKTVLRDQFLVDA
RPLNKVSGQPFRIHEIEAAIEEALA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory