Comparing Ga0059261_1047 Ga0059261_1047 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 19 hits to proteins with known functional sites (download)
5dn1A Crystal structure of phosphoribosyl isomerase a from streptomyces coelicolor (see paper)
39% identity, 98% coverage: 3:238/242 of query aligns to 6:240/240 of 5dn1A
P16250 Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
39% identity, 98% coverage: 3:238/242 of query aligns to 6:240/240 of P16250
4tx9A Crystal structure of hisap from streptomyces sviceus with degraded profar (see paper)
39% identity, 98% coverage: 3:239/242 of query aligns to 11:246/246 of 4tx9A
5abtA S.Enterica hisa mutant d7n, g102a, v106m, d176a
36% identity, 99% coverage: 2:240/242 of query aligns to 1:245/246 of 5abtA
3zs4A Crystal structure of mycobacterium tuberculosis phosphoribosyl isomerase with bound prfar
36% identity, 98% coverage: 1:236/242 of query aligns to 3:241/244 of 3zs4A
2y88A Crystal structure of mycobacterium tuberculosis phosphoribosyl isomerase (variant d11n) with bound prfar (see paper)
36% identity, 98% coverage: 1:236/242 of query aligns to 3:241/244 of 2y88A
5ab3A S.Enterica hisa mutant d7n, d10g, dup13-15, q24l, g102a (see paper)
37% identity, 97% coverage: 2:236/242 of query aligns to 1:238/241 of 5ab3A
2y85A Crystal structure of mycobacterium tuberculosis phosphoribosyl isomerase with bound rcdrp (see paper)
35% identity, 98% coverage: 1:236/242 of query aligns to 3:232/234 of 2y85A
Q9X0C7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
31% identity, 99% coverage: 1:239/242 of query aligns to 1:241/241 of Q9X0C7
1h5yB Hisf protein from pyrobaculum aerophilum (see paper)
29% identity, 73% coverage: 31:206/242 of query aligns to 34:214/253 of 1h5yB
Sites not aligning to the query:
Q9X0C6 Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
25% identity, 81% coverage: 3:198/242 of query aligns to 6:203/253 of Q9X0C6
7ac8A Molecular basis for the unique allosteric activation mechanism of the heterodimeric imidazole glycerol phosphate synthase complex. (see paper)
25% identity, 81% coverage: 3:198/242 of query aligns to 6:203/252 of 7ac8A
Sites not aligning to the query:
3zr4E Structural evidence for ammonia tunneling across the (beta-alpha)8 barrel of the imidazole glycerol phosphate synthase bienzyme complex (see paper)
26% identity, 81% coverage: 3:198/242 of query aligns to 6:194/244 of 3zr4E
Sites not aligning to the query:
1gpwC Structural evidence for ammonia tunneling across the (beta/alpha)8 barrel of the imidazole glycerol phosphate synthase bienzyme complex. (see paper)
25% identity, 81% coverage: 3:198/242 of query aligns to 6:203/253 of 1gpwC
Sites not aligning to the query:
7qc8A Imidazole glycerol phosphate synthase subunit HisF (see paper)
26% identity, 81% coverage: 3:198/242 of query aligns to 6:203/250 of 7qc8A
2wjzE Crystal structure of (hish) k181a y138a mutant of imidazoleglycerolphosphate synthase (hish hisf) which displays constitutive glutaminase activity (see paper)
31% identity, 50% coverage: 79:198/242 of query aligns to 65:189/237 of 2wjzE
Sites not aligning to the query:
6ei9A Crystal structure of e. Coli tRNA-dihydrouridine synthase b (dusb) (see paper)
31% identity, 54% coverage: 93:222/242 of query aligns to 81:211/306 of 6ei9A
Sites not aligning to the query:
P60664 Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Escherichia coli (strain K12) (see paper)
21% identity, 81% coverage: 3:198/242 of query aligns to 6:209/258 of P60664
Sites not aligning to the query:
4ewnD Structure of hisf-d130v+d176v with bound rcdrp (see paper)
24% identity, 81% coverage: 3:198/242 of query aligns to 5:196/243 of 4ewnD
Sites not aligning to the query:
>Ga0059261_1047 Ga0059261_1047 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16)
VIVFPAIDLKAGQVVRLAEGDMTRATVYGENPAAQAEAFAKAGATHLHVVDLDAAFAGES
INGGAVAAILARFPGKVQLGGGIRNRASVERWIDMGVSRVVIGTAALEDPDFVREAAAAH
PGQIVVAVDARDGFVATKGWADVSTVSIAELGHRFEDAGVAALLFTDVGRDGLLKGCNVE
ATAALAAEVSIPVIASGGVADISDIHALAGKPGIEGVITGRALYDGRLDLAEALKAAAKV
AQ
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Lawrence Berkeley National Laboratory