SitesBLAST
Comparing Ga0059261_1572 FitnessBrowser__Korea:Ga0059261_1572 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3pm9A Crystal structure of a putative dehydrogenase (rpa1076) from rhodopseudomonas palustris cga009 at 2.57 a resolution
45% identity, 96% coverage: 13:471/480 of query aligns to 8:465/465 of 3pm9A
- active site: A149 (= A152), L159 (≠ T162)
- binding flavin-adenine dinucleotide: P69 (= P70), Q70 (= Q71), G71 (= G72), G72 (= G73), N73 (= N74), T74 (= T75), G75 (≠ S76), L76 (≠ M77), G79 (= G80), Q80 (≠ A81), L91 (= L94), L133 (= L136), G134 (= G137), A135 (= A138), C139 (≠ A142), T140 (= T143), G142 (= G145), G143 (= G146), S146 (= S149), T147 (= T150), A149 (= A152), G150 (= G153), E200 (= E203), G201 (= G204), I205 (≠ V208), I206 (≠ V209), E423 (= E429)
P39976 D-2-hydroxyglutarate--pyruvate transhydrogenase DLD3; D-2HG--pyruvate transhydrogenase DLD3; (R)-2-hydroxyglutarate--pyruvate transhydrogenase; D-lactate dehydrogenase [cytochrome] 3; D-lactate ferricytochrome C oxidoreductase; D-LCR; EC 1.1.99.40; EC 1.1.2.4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
33% identity, 93% coverage: 27:471/480 of query aligns to 53:496/496 of P39976
Sites not aligning to the query:
- 17 modified: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)
6lpnB Crystal structure of human d-2-hydroxyglutarate dehydrogenase in apo form (see paper)
36% identity, 95% coverage: 14:469/480 of query aligns to 20:463/467 of 6lpnB
- binding flavin-adenine dinucleotide: W40 (= W34), P76 (= P70), G78 (= G72), G79 (= G73), N80 (= N74), T81 (= T75), G82 (≠ S76), M83 (= M77), G86 (= G80), S87 (≠ A81), L140 (= L136), A142 (= A138), C146 (≠ A142), H147 (≠ T143), G150 (= G146), N151 (≠ L147), A153 (≠ S149), T154 (= T150), G208 (= G204), I212 (≠ V208), I213 (≠ V209), E423 (= E429), N460 (= N466)
6lpxA Crystal structure of human d-2-hydroxyglutarate dehydrogenase in complex with 2-oxoglutarate (2-og) (see paper)
36% identity, 95% coverage: 14:469/480 of query aligns to 19:462/466 of 6lpxA
- binding 2-oxoglutaric acid: R333 (= R333), T337 (≠ S337), K348 (≠ Q348), Y379 (≠ F381), H381 (= H383), H388 (= H390), H423 (= H430)
- binding flavin-adenine dinucleotide: W39 (= W34), P75 (= P70), Q76 (= Q71), G77 (= G72), G78 (= G73), N79 (= N74), T80 (= T75), G81 (≠ S76), M82 (= M77), G85 (= G80), S86 (≠ A81), L139 (= L136), G140 (= G137), A141 (= A138), C145 (≠ A142), G149 (= G146), N150 (≠ L147), A152 (≠ S149), T153 (= T150), G157 (= G154), G207 (= G204), I212 (≠ V209), E422 (= E429), N459 (= N466)
- binding zinc ion: H381 (= H383), H388 (= H390), E422 (= E429)
6lpuA Crystal structure of human d-2-hydroxyglutarate dehydrogenase in complex with l-2-hydroxyglutarate (l-2-hg) (see paper)
36% identity, 95% coverage: 14:469/480 of query aligns to 19:462/466 of 6lpuA
- binding flavin-adenine dinucleotide: W39 (= W34), P75 (= P70), G77 (= G72), G78 (= G73), N79 (= N74), T80 (= T75), G81 (≠ S76), G85 (= G80), S86 (≠ A81), L139 (= L136), G140 (= G137), A141 (= A138), C145 (≠ A142), H146 (≠ T143), G148 (= G145), G149 (= G146), N150 (≠ L147), A152 (≠ S149), T153 (= T150), A155 (= A152), E206 (= E203), G207 (= G204), I211 (≠ V208), I212 (≠ V209), E422 (= E429), N459 (= N466)
- binding (2s)-2-hydroxypentanedioic acid: R333 (= R333), T337 (≠ S337), K348 (≠ Q348), Y379 (≠ F381), H381 (= H383), H388 (= H390), H423 (= H430)
- binding zinc ion: H381 (= H383), H388 (= H390), E422 (= E429)
6lpqA Crystal structure of human d-2-hydroxyglutarate dehydrogenase in complex with d-malate (d-mal) (see paper)
36% identity, 95% coverage: 14:469/480 of query aligns to 19:462/466 of 6lpqA
- binding flavin-adenine dinucleotide: W39 (= W34), P75 (= P70), G77 (= G72), G78 (= G73), N79 (= N74), T80 (= T75), G81 (≠ S76), G85 (= G80), S86 (≠ A81), L139 (= L136), G140 (= G137), A141 (= A138), C145 (≠ A142), H146 (≠ T143), G149 (= G146), N150 (≠ L147), A152 (≠ S149), T153 (= T150), A155 (= A152), G157 (= G154), E206 (= E203), G207 (= G204), I211 (≠ V208), I212 (≠ V209), E422 (= E429), N459 (= N466)
- binding d-malate: M82 (= M77), R333 (= R333), T337 (≠ S337), K348 (≠ Q348), Y379 (≠ F381), H381 (= H383), H388 (= H390), E422 (= E429), H423 (= H430)
- binding zinc ion: H381 (= H383), H388 (= H390), E422 (= E429)
6lppA Crystal structure of human d-2-hydroxyglutarate dehydrogenase in complex with d-2-hydroxyglutarate (d-2-hg) (see paper)
36% identity, 95% coverage: 14:469/480 of query aligns to 19:462/466 of 6lppA
- binding (2R)-2-hydroxypentanedioic acid: R333 (= R333), T337 (≠ S337), K348 (≠ Q348), Y379 (≠ F381), H381 (= H383), H388 (= H390), N390 (≠ H392), H423 (= H430)
- binding flavin-adenine dinucleotide: W39 (= W34), P75 (= P70), G77 (= G72), G78 (= G73), N79 (= N74), T80 (= T75), G81 (≠ S76), M82 (= M77), G85 (= G80), S86 (≠ A81), L139 (= L136), G140 (= G137), A141 (= A138), C145 (≠ A142), G149 (= G146), N150 (≠ L147), A152 (≠ S149), T153 (= T150), A155 (= A152), G157 (= G154), G207 (= G204), I212 (≠ V209), E422 (= E429), H423 (= H430)
- binding zinc ion: H381 (= H383), H388 (= H390), E422 (= E429)
Q8N465 D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Homo sapiens (Human) (see 7 papers)
36% identity, 95% coverage: 14:469/480 of query aligns to 72:515/521 of Q8N465
- S109 (≠ T51) to W: in D2HGA1; unknown pathological significance; significant loss of catalytic activity; dbSNP:rs142050154
- N127 (≠ V69) to K: in D2HGA1; unknown pathological significance; complete loss of catalytic activity; dbSNP:rs762857195
- G131 (= G73) to V: in D2HGA1; unknown pathological significance; complete loss of catalytic activity
- I147 (= I91) to S: in D2HGA1; severe phenotype; unknown pathological significance; almost complete loss of catalytic activity; dbSNP:rs121434361
- M153 (≠ L97) to T: in D2HGA1; unknown pathological significance; significant loss of catalytic activity; to V: in D2HGA1; unknown pathological significance; significant loss of catalytic activity; dbSNP:rs1432270139
- C172 (≠ V116) to Y: in D2HGA1; unknown pathological significance; moderate reduction in catalytic activity; dbSNP:rs773735172
- P189 (= P133) to L: in D2HGA1; unknown pathological significance; almost complete loss of catalytic activity; dbSNP:rs587783517
- A205 (≠ S149) to V: in D2HGA1; unknown pathological significance; almost complete loss of catalytic activity; dbSNP:rs750889931
- A231 (= A175) to V: in D2HGA1; unknown pathological significance; significant loss of catalytic activity
- G233 (= G177) to S: in D2HGA1; unknown pathological significance; no effect on catalytic activity; dbSNP:rs374535734
- D375 (≠ N322)