Comparing Ga0059261_1979 FitnessBrowser__Korea:Ga0059261_1979 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
5h8iC Crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with n-(dihydroxymethyl)putrescine (see paper)
49% identity, 98% coverage: 3:281/284 of query aligns to 8:292/301 of 5h8iC
5h8jB Crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with cadaverine (see paper)
49% identity, 98% coverage: 3:281/284 of query aligns to 4:288/297 of 5h8jB
5h8lB Crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) c158s mutant in complex with putrescine (see paper)
49% identity, 98% coverage: 3:281/284 of query aligns to 5:289/298 of 5h8lB
6ypaB The c146a variant of an amidase from pyrococcus horikoshii with bound glutaramide
34% identity, 93% coverage: 16:279/284 of query aligns to 22:269/269 of 6ypaB
7ovgA The c146a variant of an amidase from pyrococcus horikoshii with bound acetamide (see paper)
34% identity, 93% coverage: 16:279/284 of query aligns to 16:263/263 of 7ovgA
3klcB Crystal structure of hyperthermophilic nitrilase (see paper)
33% identity, 92% coverage: 18:279/284 of query aligns to 16:261/261 of 3klcB
3klcA Crystal structure of hyperthermophilic nitrilase (see paper)
33% identity, 92% coverage: 18:279/284 of query aligns to 16:261/261 of 3klcA
Sites not aligning to the query:
Q9UYV8 Nitrilase; PaNit; EC 3.5.5.1 from Pyrococcus abyssi (strain GE5 / Orsay) (see paper)
33% identity, 92% coverage: 18:279/284 of query aligns to 17:262/262 of Q9UYV8
Q9NQR4 Omega-amidase NIT2; Nitrilase homolog 2; EC 3.5.1.3 from Homo sapiens (Human) (see 2 papers)
32% identity, 98% coverage: 1:277/284 of query aligns to 1:269/276 of Q9NQR4
Q44185 N-carbamoyl-D-amino acid hydrolase; D-N-alpha-carbamilase; EC 3.5.1.77 from Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) (see paper)
31% identity, 96% coverage: 11:282/284 of query aligns to 15:303/304 of Q44185
8hpcC Crystal structure of c171a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-hydroxyphenylglycine
31% identity, 96% coverage: 11:282/284 of query aligns to 14:302/303 of 8hpcC
1uf8A Crystal structure of c171a/v236a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-phenylalanine
31% identity, 96% coverage: 11:282/284 of query aligns to 14:302/303 of 1uf8A
1uf7A Crystal structure of c171a/v236a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-valine
31% identity, 96% coverage: 11:282/284 of query aligns to 14:302/303 of 1uf7A
1uf5A Crystal structure of c171a/v236a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-methionine
31% identity, 96% coverage: 11:282/284 of query aligns to 14:302/303 of 1uf5A
Q94JV5 Deaminated glutathione amidase, chloroplastic/cytosolic; dGSH amidase; Nitrilase-like protein 2; Protein nitrilase 1 homolog; AtNit1; Protein Nit1 homolog; EC 3.5.1.128 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
27% identity, 95% coverage: 4:272/284 of query aligns to 37:302/307 of Q94JV5
Sites not aligning to the query:
4hg5A Structural insights into yeast nit2: wild-type yeast nit2 in complex with oxaloacetate (see paper)
25% identity, 96% coverage: 6:277/284 of query aligns to 5:303/304 of 4hg5A
4hg3A Structural insights into yeast nit2: wild-type yeast nit2 in complex with alpha-ketoglutarate (see paper)
25% identity, 96% coverage: 6:277/284 of query aligns to 5:303/304 of 4hg3A
P47016 Deaminated glutathione amidase; dGSH amidase; Nitrilase homolog 1; EC 3.5.1.128 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
25% identity, 96% coverage: 6:277/284 of query aligns to 8:306/307 of P47016
4hgdA Structural insights into yeast nit2: c169s mutant of yeast nit2 in complex with an endogenous peptide-like ligand (see paper)
25% identity, 96% coverage: 6:277/284 of query aligns to 4:299/299 of 4hgdA
4izuA The e41q mutant of the amidase from nesterenkonia sp. An1 showing the result of michael addition of acrylamide at the active site cysteine
27% identity, 93% coverage: 16:278/284 of query aligns to 15:251/254 of 4izuA
>Ga0059261_1979 FitnessBrowser__Korea:Ga0059261_1979
MTQITVAALQLAFSNDVEQNIANVTDLVREAASKGAQVVLPPELFEGEYFCRVEDEALFA
TARPLASHPAVTAMQALAAELQIHIPTSFFEADGPHFYNSLAMIGPDGKVAGVYRKSHIP
DGPGYEEKYYFRPGNTGFKVWDGPADDAALGVGICWDQWYPETARTMMLMGAQLLFYPTA
IGSEPYDADLDTSRMWRRAMIGHAVSNVVPVIASNRIGTEGDQRFYGHSFICDEWGDILA
EFGAEETGVLTATLDLDRARKHRAGMGFFRDRRPELYRRMVEDI
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory