Comparing Ga0059261_1981 FitnessBrowser__Korea:Ga0059261_1981 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 6 hits to proteins with known functional sites (download)
Q837U5 Putative agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Enterococcus faecalis (strain ATCC 700802 / V583) (see paper)
31% identity, 98% coverage: 6:321/321 of query aligns to 18:364/365 of Q837U5
6nicD Crystal structure of medicago truncatula agmatine iminohydrolase (deiminase) in complex with 6-aminohexanamide (see paper)
33% identity, 98% coverage: 6:320/321 of query aligns to 6:358/360 of 6nicD
G7JT50 Agmatine deiminase; Agmatine iminohydrolase; MtAIH; EC 3.5.3.12 from Medicago truncatula (Barrel medic) (Medicago tribuloides) (see paper)
33% identity, 98% coverage: 6:320/321 of query aligns to 16:372/374 of G7JT50
3h7cX Crystal structure of arabidopsis thaliana agmatine deiminase from cell free expression
33% identity, 98% coverage: 6:320/321 of query aligns to 16:365/369 of 3h7cX
Q8GWW7 Agmatine deiminase; Agmatine iminohydrolase; Protein EMBRYO DEFECTIVE 1873; EC 3.5.3.12 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
33% identity, 98% coverage: 6:320/321 of query aligns to 16:372/383 of Q8GWW7
6b2wA C. Jejuni c315s agmatine deiminase with substrate bound (see paper)
30% identity, 97% coverage: 7:317/321 of query aligns to 14:326/333 of 6b2wA
>Ga0059261_1981 FitnessBrowser__Korea:Ga0059261_1981
MKATPPPEWAKHKAVWIGFPSHPELWESLNAARAEVAAFARAVHADGAGEQVLLVAADEE
AATAARLLAGDAAKVVVAPFGDIWLRDTGVIVDNRGVGHDFEFNGWGGKYHYEGDVEVGA
LLADKRRMEVQPHDWVLEGGSIDWDGTGLVVTTEQCLLNRNRNPTLSQREAEERLYTDLG
FDRVLWLGNGLAMDHTDGHVDNLARFVGENRLAIPVPEENDPNWLVYADARRRAEAFGVE
VVPIPSPGRVIHGDEVVPASYMNFYIGNAAVVIPVYGQPNDRKAVETIGALFPGREAVGL
RADHILTGGGSFHCISQQIPK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory